Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00492 ATGTTGGGTGGTGCACTTTCAACCCCAATAACTCAAAGCCTCAATGCAACAAGAACAGTTGCAATGCTCTATCCAACTCACAGATTATTGTCTCTTAAGAACCCAGAGACAAATACCAGAGGATTTTCGTCAAAATACAATATTTTTATCAGGGGTCACCAAATCAACATAAAGCAACTTTTTGGGCTTATCTCGGGTCGTGCTCCCCTATACAAAGCAGGTACTAGTTACTCTCAATGCATTCATTCCTATGTTGCAGGGCTTGTTGTTTCCCCAATCTGTGCCCTACCACTGACAGAAGATAACGTGGAGAAGGTTTTGGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCATTACATGAGATAGATGGTCTTGTTGTTGTCCTCAAGCTACAAGGGGCATGTGGATCATGTCCTAGCTCAACTATGACATTGAAAATGGGAATAGAAACTCGTCTCAGGGATAAGATTCCAGAAATCATGGAAGTGGAGCAGATAATGGACACTGAGACTGGTCTCGAGTTAACAGAAGAAAATGTAGAAAAAGTCCTTTCTGAAATTAGACCATACCTTGTTGGCACTGGAGGAGGAATATTAGAGCTTGTTCAGATGAATGATTATGTTGTCAAAGTTCGGCTAAGTGGACCTGCAGCTGGGGTTTCGACAGTTCGTGTTGCCTTAACACAGAAGCTGAGAGACAAGATACCTTCTATTGCAGCTGTGCAACTAATAGACTAA 750 0.428 MLGGALSTPITQSLNATRTVAMLYPTHRLLSLKNPETNTRGFSSKYNIFIRGHQINIKQLFGLISGRAPLYKAGTSYSQCIHSYVAGLVVSPICALPLTEDNVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQIMDTETGLELTEENVEKVLSEIRPYLVGTGGGILELVQMNDYVVKVRLSGPAAGVSTVRVALTQKLRDKIPSIAAVQLID* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00492 249 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 178 248 IPR034904 -
Lapu9g00492 249 Pfam NifU-like domain 103 168 IPR001075 GO:0005506|GO:0016226|GO:0051536
Lapu9g00492 249 Pfam NifU-like domain 184 246 IPR001075 GO:0005506|GO:0016226|GO:0051536
Lapu9g00492 249 Gene3D - 177 249 IPR034904 -
Lapu9g00492 249 FunFam NifU-like protein 3, chloroplastic 178 248 - -
Lapu9g00492 249 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 98 247 - -
Lapu9g00492 249 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 100 175 IPR034904 -
Lapu9g00492 249 FunFam NifU-like protein 3, chloroplastic 95 177 - -
Lapu9g00492 249 Gene3D - 94 176 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00492 Lapu-Chr9 5508181 5510314 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00492 - - gmx:100806364 402.134