Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00480 ATGGCATTTTCATATAAACAATTTCTTCTTCTTTTGTTGATAACCTTTTCAACATGTTGTTTCTCATCAACTAGCAGCATTTCATCTTCTAAACCTCAAAGACTGGTCTCCAAACTCATTCACCCGAGCTCAATTCACCATCCCCACTACAAGCCACATGAAAAAGCCAAAGACCGAATGGAACTTGATATCCAACACTCAGCAGCACGTTTAGCCTACATACATGGAAGGATAGAAGGTTCTTTGGTCTCTAATAATGACCACAAAGCTAGTGCTTCTCCCTCCTTAACTGGTAGAACCATACTGGCCAATATCTCAATAGGCCAACCCCCTGTCCCACAACTAGTTGTTATAGACACTGCCAGTGACGCCTTCTGGGTCATGTGCTCCCCTTGCACAAATTGTGACAACCATTTAGGTCCACTCTTTGACCCGTTAAAGTCTTCCACCTTTTTCCCACAGTGCAAAATACCATGTGCCTTCAAGGGTTGCAAATGTGATCCTATTCCATTTAGTGCCTCTTATGCAGATAGCTCCACTGCTTCAGGAACATATGGCCGTGATACTGTTGTCTTTGAGACAACTGATGAAGGTACGTCTCAGATATTTGATGTACTATTTGGATGTGGCCACTACATTGGATACAATTCAGATCCAGGACACAATGGAATACTAGGACTAAACAGTGCAGCTGAATCTTTGGCAACAAAAATTGGCCAAAAGTTTTCTTACTGCATAGGCAACCTGTCTGACCCTTATTACAATTACAACCAACTGATATTAGGTGCAGGGGCAGATCTTGAAGGGTTTTCCACCCCTTTTGAAGTCCACAATGGCTTTTATTATGTCACCATGGAAGGCATAAGTTTAGGGGAAAAAAGGCTTGACATAGCTCCCGGAACTTTTGAGATGAAAGAGAATGGCACAGGTGGAGTCATCATCGACACAGGGAGCACTATCAGCTACCTAGTTGATGATGTGCACAAACAAATATACAAAGAAGTTAGAAATCTCATTGGTTGGTCCTTTAGAGGAGCAAGAATTGAAAATTCCCCATGGATGTTGTGTTATTATGGGAGTATCAGTAGAGATCTAGCTGGGTTTCCAGTTGTTACATTCCATTTTGCTGATGGAGCAGATTTGGCTATGGATTCCGGAAGCTTTTTTAGTCAAGTGAGTGATGACATATTTTGCATGACTATAGGTCCAGCCAGTAACATTGACATTAAAAGTAAGCCTTCAGTTATTGGATTGTTAGCTCAACAGAGTTACAACGTGGGATATGACCTAGTTAATAAGTTTGTTTACTTCCAAAGAATTGATTGTGAACTTCTTAGTGGTTGA 1344 0.4122 MAFSYKQFLLLLLITFSTCCFSSTSSISSSKPQRLVSKLIHPSSIHHPHYKPHEKAKDRMELDIQHSAARLAYIHGRIEGSLVSNNDHKASASPSLTGRTILANISIGQPPVPQLVVIDTASDAFWVMCSPCTNCDNHLGPLFDPLKSSTFFPQCKIPCAFKGCKCDPIPFSASYADSSTASGTYGRDTVVFETTDEGTSQIFDVLFGCGHYIGYNSDPGHNGILGLNSAAESLATKIGQKFSYCIGNLSDPYYNYNQLILGAGADLEGFSTPFEVHNGFYYVTMEGISLGEKRLDIAPGTFEMKENGTGGVIIDTGSTISYLVDDVHKQIYKEVRNLIGWSFRGARIENSPWMLCYYGSISRDLAGFPVVTFHFADGADLAMDSGSFFSQVSDDIFCMTIGPASNIDIKSKPSVIGLLAQQSYNVGYDLVNKFVYFQRIDCELLSG* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00480 447 CDD pepsin_A_like_plant 102 442 IPR034161 -
Lapu9g00480 447 Gene3D Acid Proteases 269 445 IPR021109 -
Lapu9g00480 447 ProSiteProfiles Peptidase family A1 domain profile. 101 438 IPR033121 -
Lapu9g00480 447 Pfam Xylanase inhibitor C-terminal 281 438 IPR032799 -
Lapu9g00480 447 Pfam Xylanase inhibitor N-terminal 103 261 IPR032861 -
Lapu9g00480 447 FunFam Aspartyl protease family protein 265 444 - -
Lapu9g00480 447 PANTHER OS07G0603500 PROTEIN-RELATED 38 442 - -
Lapu9g00480 447 SUPERFAMILY Acid proteases 102 442 IPR021109 -
Lapu9g00480 447 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 312 323 IPR001969 GO:0004190|GO:0006508
Lapu9g00480 447 Gene3D Acid Proteases 90 256 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00480 Lapu-Chr9 5293533 5294876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00480 105 445 Miscellaneous Gene Families AT1G44130 22.606 8.00e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00480 - - vum:124821182 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00480 9 5293533 5294876 Lapu9g00480 9 5293533 5294876 ECH