Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00463 ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCGGAGGCTGCTTCAGTGTTGAAGCACTCTCTTGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACCCCTCTGCATGTGGCTGCAACTTTGCTGAGCCTAAGAGCCAGTTCCTTGAGAAGGGCTTGTCTCAAATCTCAGCCACACCAAACATCACACCCTCTTCAGTGCAGAGCCCTTGAGCTTTGCTTCAATGTGGCCCTCAACAGGCTCCCAACAACACCTGGTCCCTTGCTCCACACACAGCCTTCTCTCTCCAATGCTCTCATTGCTGCACTCAAGAGAGCACAGGCTCACCAGAGAAGAGGCTGCATTGAGCAGCAGCAGCAGCAGCCACTTCTCACCATCAAGGTGGAGCTTGAACAGCTCATTATATCTATCCTTGATGACCCTAGTGTTAGCAGGGTTATGAGAGAGGCTGGTTTCTCTAGCACTGCTGTTAAGAGCAACATAGAGGACACCTCTTCAACACCTTCTGTTTTCCAGTGTTACAACAGTTCTGGTGGTGTTTTCTCTTCTCCTTGTTCTCCTGCTCCAAGTGAGAACAACACAGCCAGTGCCTTCAGGCAGAACCATTTCTTGGCTGCTTACACTTCTTCTGAGTTCAGTGCTCCACTTCTGTTCTCTCCGCAGAAGAAGGCCTCGGTGTTTCCCGTCACTGAGTCACCACCACCCTCTTCCAAGGAGGATATCAAGGTGGTTCTTGATGTCCTCTTGAGGAAGAAGAAGAGGAACACTGTGATAGTTGGCGACTCAGTGGCACTCACTGAAGGCCTCGTCGGAGAGCTAATGGGGAAGTTGGAAAGAGGAGATGTGCCTGATGAGTTGAAGTCAACACATTTCATCAAGTTTCAGCTTGCACCGGTTTCTCTGAGGTTCATGAAAAGGGAAGAAGTGGAGATGAGTCTCTCAGCACTGAAGAGGAAGGTAGATTCTGTTGCATCTGGAGGAGGAGCCATTTTCTATGTTGGAGACCTCAAGTGGACAGTGGAAGCAACAACTTCTAGTGAAAAGGATGAAGGAGAAGTTTGTGGCTATAACCCAGTTGATCATCTACTCGCTGAAATAGGGAAGCTATTTTGTGATTCCAACACAAAGGTGTGGCTTGTAGCCACAGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCCCCTCTTGAGACTCAGTGGGCTCTTCAAGCTGTTCCTGTTCCATCTGGTGGACTTGGCTTGAGTCTCCATGCTTCCAGTACGTACGGTCTCTGGACTATGCCAGAAGCCACTGTCAAAAGCATGGTTGGTTGTGTTCACGATTCAAAGATGACAATCTCCCAGAATCCATCTCATGTGCTGGAAACAAAGTTCTTCAGTAACAGCAAGGAGGAGCAGGATAAACTCAACTGCTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCTCAGTTGTTCAAACCAGGCCAGAAGAAACTGTTGCCTTCCTGGCTTCAGTCTCATACCACCGAAGCCCATCAAAAGTTGGTAGAGAAAGTGGCTTATGAAGAAATTCAATATTTTCAGGATGAGTTGCTTCAGTTGAAGAGGAAATGGAACAGACTATGCCACTGTCTGCACCAGAGCAAACAGTCTGAAAACCATTGGAGCAACACTTTACATGGCAATCAGAGTTCAAATGGGAAGATCTACCCTTACAATTCATCATACCCCTGGTGGCCTAACCAAGGTAGTGTCTTCACGGATTCAAGCTCAATATCTTTTGCTGATTCACCTGCTAAACCGGCTTATAGCTCCAACATTGTCCCTCGGTTCCGACGACAACAATCATGCACCATTGAGTTCAATTTCAGTGATGTGACTCAGAGAAAGCCATCCACAGCCTTGGATTCTCTCAAGGGCATGGAAGGTAATAATAACGAAGTAAAGATTACTCTTGCTCTTGGAAATTCAACATTCGGTGGTTCAGGGCAAACGGTGGAAAATATCATAACTACTGATAGAACACTGCGACGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAATATGAGACAGTTCCTTCCATAGCTGAGGCCTTAGTTGATTCCAAATCTGCAAAGCAAAGTGCTACTACTTGGTTGATGTTACAAGGAACTGACTCTATTGGGAAAACAAGGTTGGCACGTGCGATTGCCGAATCAGTTTTTGGCTCAGTTGATGTGCTCCTTCACTTGGACATGCTGAAAAATTCAGCAGCCCCATTTGCTGAGAGGGTGGCTGGAGCACTGAAAATTCATGGGAAGCTTGTGATTCTGATAGAAAATTTGGATTTTGCTGATGCCCAGTTCAGGAAGTTTCTTGCAGATGGGTTTGAAACTGGAAACTTTGGAAGTTTAAGTAGGACTGAGGAGAGTTCGGGCCAAGCAATATTCATATTGACCAATGGTGACACCAGGGGCAATGAAGAACAGAACAATAAGGAGTCAGTGATAAAGTTGGTGTTGCAGATAAGTGAAACGAAGCCTGCTTTGGAGTCTTCATCACCTTGTTTGGGTCAGAAGAGAAGGGCTGAAGTGCTGGATTTGTTTTCCAAGGTTAAGAATCCAAGGGTGGAGGAGAAGGAGGAGATTAGGAAAGTGTTTTCGAGGCATTCAAGCTTCAACAATCTTGACCTGAACATGAAAGCTGATGAAGAGGATGATGGGGAAGAGAAAACAGGTGGAAGTAGTCCAATTTCAAGTGATTTGACAAGGGAAACTGTGGCGGATCCATTGAGCTGGAATGGGGCTCTTGACTCAATTGAGAACAGGTTTGAGTTGAATGAAAGTCCAGAGAGGGAGAGGGAGGTGGGAGAGATGTTTCTGTCAAAGATGAAAGAATCTTTTGAGGAGGTTTATGGTAAAGAATGTGTGGGGAAATTTACTGTAGAGGAGAGGGTGATAGAGGAAATTGGTGTGGGGTGTGGAAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTACAGACAGTTAACTTTGGTGGGGAGGAGGGGGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGGAGATAGGAAATGGGATAGTGGATTCATGGGTTCATGTTTGCCCAAGAATCTCCAAGTTAACTACATGGATTGA 3168 0.4599 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPHQTSHPLQCRALELCFNVALNRLPTTPGPLLHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKSNIEDTSSTPSVFQCYNSSGGVFSSPCSPAPSENNTASAFRQNHFLAAYTSSEFSAPLLFSPQKKASVFPVTESPPPSSKEDIKVVLDVLLRKKKRNTVIVGDSVALTEGLVGELMGKLERGDVPDELKSTHFIKFQLAPVSLRFMKREEVEMSLSALKRKVDSVASGGGAIFYVGDLKWTVEATTSSEKDEGEVCGYNPVDHLLAEIGKLFCDSNTKVWLVATASYQTYMRCQMRQPPLETQWALQAVPVPSGGLGLSLHASSTYGLWTMPEATVKSMVGCVHDSKMTISQNPSHVLETKFFSNSKEEQDKLNCCEECASNYEKEAQLFKPGQKKLLPSWLQSHTTEAHQKLVEKVAYEEIQYFQDELLQLKRKWNRLCHCLHQSKQSENHWSNTLHGNQSSNGKIYPYNSSYPWWPNQGSVFTDSSSISFADSPAKPAYSSNIVPRFRRQQSCTIEFNFSDVTQRKPSTALDSLKGMEGNNNEVKITLALGNSTFGGSGQTVENIITTDRTLRRAHICKLLQENVPWQYETVPSIAEALVDSKSAKQSATTWLMLQGTDSIGKTRLARAIAESVFGSVDVLLHLDMLKNSAAPFAERVAGALKIHGKLVILIENLDFADAQFRKFLADGFETGNFGSLSRTEESSGQAIFILTNGDTRGNEEQNNKESVIKLVLQISETKPALESSSPCLGQKRRAEVLDLFSKVKNPRVEEKEEIRKVFSRHSSFNNLDLNMKADEEDDGEEKTGGSSPISSDLTRETVADPLSWNGALDSIENRFELNESPEREREVGEMFLSKMKESFEEVYGKECVGKFTVEERVIEEIGVGCGNFTNSMFEKWLKDIFQSSLQTVNFGGEEGGIGFTLCWGGKGDRKWDSGFMGSCLPKNLQVNYMD* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00463 1055 MobiDBLite consensus disorder prediction 893 920 - -
Lapu9g00463 1055 FunFam protein SUPPRESSOR OF MAX2 1 9 170 - -
Lapu9g00463 1055 Gene3D - 9 170 IPR036628 -
Lapu9g00463 1055 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Lapu9g00463 1055 Pfam Clp amino terminal domain, pathogenicity island component 131 166 IPR004176 -
Lapu9g00463 1055 SUPERFAMILY Double Clp-N motif 12 165 IPR036628 -
Lapu9g00463 1055 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1019 - -
Lapu9g00463 1055 Gene3D - 661 885 IPR027417 -
Lapu9g00463 1055 Gene3D - 233 414 IPR027417 -
Lapu9g00463 1055 ProSiteProfiles Clp repeat (R) domain profile. 8 170 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00463 Lapu-Chr9 5012899 5017353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00463 - - gmx:102660146 1684.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00463 9 5012899 5017353 Lapu9g00463 9 5012899 5017353 ECH