Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00451 ATGATGGCTCAGGCTATAGTGAACTTCATAGTGCAAAGTCTTGGTGATTTGCTCATTCAAGAAGCAGTGTTCCTTTATGGGGTGGAAGCCCGAGTGTTGCAGCTGCAAACTGAATTGAGGATGATGCGGTCTTACTTGCAAGATGCAGATAGAAGACAAGATGAAAATGAAAGCCTAAGGAGTTGGATTTCAGAAATCAGAGAAGCTGCTTATGATTCTGATGATGTCATTGAGTCATATGCCCTCAAAGAGGCCTCAAGAAGAAATTTGCCAGGTGTGTTAAACATCATCAAAAGGTATGCTTCAATCATCAACCGGTTTATAGAAATCCACATGGTGGGATCTCATGTTGATAACGTCATAGCTAGGATTTCTAGCCTCACAAGGAGTCTTAAAACCTATGGCATAAAACCTGAGAAGGGAGAGACCTCAAATTCTATGCACGGGAGACAGAGTTTTAGGAGGTCTTATTCACATGTCATTGAAGAGGACATAGTTGGTGTTGACAATGATGTCAAGATTTTGGAGTCATCTTTGGTCGACCCCAGTAAAAGGTATAAAGTAGTGGCCATTTGTGGGATGGGGGGATTGGGGAAGACAACATTGGCAAAGAAGGTGTACCATAGTGTTGATGTGAGGAACAATTTTGAGAGCTTTGCTTGGGCTTACATATCACAGCATTGCCAAGCAAGGGATGTGTGGAAAGGAATTTTGTTTAGGCTGATCTCTCCTTCCCAAGAGCAAAGACAGGAAATTGACAATCTCAGAGATGAGGACCTTGCAAAGATGCTTTACCAAGTTCAAGTGGAGAAGAGTTGCTTAGTAGTCCTTGATGATATTTGGAATGCAGACACATGGAACAAACTGAATCCTGCTTTCCCTCATGGAAGATCAATATCAGCAGTTGGTAGCAAAATATTGATAACTTCTCGAAACATTGATGTTGCATTGCAGATGGATCCTAGTTGTTATCTTCACACACCAGAATGTTTGAATGAAGTTGACAGCTGGGAGTTGTTCCAAAAGAAGGCCTTTCCAGAAATTGTTGATCCAGACTACAGAGAGAAGGAGAAGTTGGGAAGGGAAATGGTTGGAAGATGTGGAGGTTTACCATTGGCTATCATTGTTCTTGGAGGACTGTTAGCATCAAAGCCTACATTCTATGAATGGGACACTGTGCGGCAGAACATCAACTCATATTTGAGGAGAGCAAACGGCCAAGAACAACGCTTAGAAGAGGTGTTGGCTTTGAGCTATTACGAATTACCATACCAGTTGAAGCCATGCTTCCTACACTTGGCTCATTTCCCTGAAAATATAGAGATACCAACAAAAAAACTGATTAGAATATGGGTGGCAGAGGGTATTATATCTTTGGCTCATAATGAAGGAGAAGGTGAGGAAGCTCTTGAGGATATGGCACAACGTTACTTGACTGAGCTAGTGGAGAGGTGCATGATTCAGGTAGTTGAAAAGAGTTCATCAGGAAGAATTAGAACTTGCCAAATGCACAACCTCATGAGGGAACTTTGTGTTGAGAAGGCATATGAGGAAAACTTTCTTTTGGAGATCGATTCCCGGAATGTAGATGAAACTAGAGGGACATCAAGAGCAAGGCCAGTGGGAAAAGTTCGCAGGATTGCCTTGTATTTGGATCAAGATGTTGGTAGGTTCTTCCCTTCACACCTGAAAAGCCACCACCATTTAAGATCTCTTCTTTGCTTCCATGAAAAGACAGCTAGGCTGAATGAATGGGGATTGATGAAGTCATTTTTCAAAAAATGTAGGTTACTCAGAGTCTTGAACTTGGAAGGAATACAGAGTCAGGGAGGGAAGTTGCCAAAAGAAATCGGCTACTTGATCCACCTAAGGTTTCTCAGTCTCAGAAATACAAAAATTGATGAGTTGCCCACATCAATAGGCAATTTAAAATGCTTGATGACCCTGGATCTTCTAACGGGGAATTCAACTGTGCAAATACCAAATGTCATAGGGAACATGCAAAAAATGAGACATTTGTACCTACCAGAGTCTTGTGGTTATAGCATTGAAAGGTGGCAATTGGACAACCTCAAAAACTTGCAGACCTTGATTAACTTCCCTGCAGAAAAGTGTCATGTAAGAGATCTCATGAAATTAACTAATTTGAGAAAATTGGTGATAGATAATCCTAATTTTGGAGATATCTTTAGGTATCCTGATGTGCATTTTAGCCACCTAGAGTCATTGTTTTTTGTTAGTCATGAAAATATATCAATTCTCGATGTTGCATTAGGATGTCCTAATCTTTACAAACTGCACATTGAAGGTCCTATAAAGAATTTTCCTGAACCCCATCAACTTTCTTCCAAGCTTCAGAAGCTAAAATTGATGGGTTCTGGACTTCTTGTAGATCCAATGCCAACATTAGAGAAACTTCCCAATTTAAGGTTGCTTGAGCTACAACTAGATTCATTCATAGGCAAGCAACTACACTGTTCCAGCTTTGGCTTTGCTCAGCTCAAGTATCTGGTTTTCCATGATTTGTTCAATCTTGAGGAATGGAAGTTGGATAAAGGAGCCATGCCTTGTCTTAGAGAACTTAAGATTGAAAATTGCACCAAGCTTGAGAAGGTTCCAGATGGGCTCAGATTTCTGACCACTCTTCAGGATTTGGAGATCAGATCAATGTTTGCAGCATTCAGAACCAAACTTGAAAAAGGAGGAGAGGATCATTACAAAATCCAACATGTGCCAACTGTGGTTTTCTCTTATTGTGACTATTAG 2766 0.4074 MMAQAIVNFIVQSLGDLLIQEAVFLYGVEARVLQLQTELRMMRSYLQDADRRQDENESLRSWISEIREAAYDSDDVIESYALKEASRRNLPGVLNIIKRYASIINRFIEIHMVGSHVDNVIARISSLTRSLKTYGIKPEKGETSNSMHGRQSFRRSYSHVIEEDIVGVDNDVKILESSLVDPSKRYKVVAICGMGGLGKTTLAKKVYHSVDVRNNFESFAWAYISQHCQARDVWKGILFRLISPSQEQRQEIDNLRDEDLAKMLYQVQVEKSCLVVLDDIWNADTWNKLNPAFPHGRSISAVGSKILITSRNIDVALQMDPSCYLHTPECLNEVDSWELFQKKAFPEIVDPDYREKEKLGREMVGRCGGLPLAIIVLGGLLASKPTFYEWDTVRQNINSYLRRANGQEQRLEEVLALSYYELPYQLKPCFLHLAHFPENIEIPTKKLIRIWVAEGIISLAHNEGEGEEALEDMAQRYLTELVERCMIQVVEKSSSGRIRTCQMHNLMRELCVEKAYEENFLLEIDSRNVDETRGTSRARPVGKVRRIALYLDQDVGRFFPSHLKSHHHLRSLLCFHEKTARLNEWGLMKSFFKKCRLLRVLNLEGIQSQGGKLPKEIGYLIHLRFLSLRNTKIDELPTSIGNLKCLMTLDLLTGNSTVQIPNVIGNMQKMRHLYLPESCGYSIERWQLDNLKNLQTLINFPAEKCHVRDLMKLTNLRKLVIDNPNFGDIFRYPDVHFSHLESLFFVSHENISILDVALGCPNLYKLHIEGPIKNFPEPHQLSSKLQKLKLMGSGLLVDPMPTLEKLPNLRLLELQLDSFIGKQLHCSSFGFAQLKYLVFHDLFNLEEWKLDKGAMPCLRELKIENCTKLEKVPDGLRFLTTLQDLEIRSMFAAFRTKLEKGGEDHYKIQHVPTVVFSYCDY* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00451 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 433 IPR027417 -
Lapu9g00451 921 SUPERFAMILY L domain-like 502 889 - -
Lapu9g00451 921 Gene3D - 425 514 IPR036388 -
Lapu9g00451 921 Pfam NB-ARC domain 174 419 IPR002182 GO:0043531
Lapu9g00451 921 Gene3D - 330 423 IPR042197 -
Lapu9g00451 921 Gene3D - 6 113 - -
Lapu9g00451 921 PRINTS Disease resistance protein signature 367 381 - -
Lapu9g00451 921 PRINTS Disease resistance protein signature 267 281 - -
Lapu9g00451 921 PRINTS Disease resistance protein signature 188 203 - -
Lapu9g00451 921 PRINTS Disease resistance protein signature 804 820 - -
Lapu9g00451 921 FunFam Probable disease resistance protein At5g66910 330 418 - -
Lapu9g00451 921 Gene3D Ribonuclease Inhibitor 535 902 IPR032675 -
Lapu9g00451 921 FunFam Probable disease resistance protein At1g63360 419 513 - -
Lapu9g00451 921 Gene3D - 152 324 IPR027417 -
Lapu9g00451 921 PANTHER DISEASE RESISTANCE PROTEIN RP 34 868 IPR044974 GO:0006952
Lapu9g00451 921 FunFam Probable disease resistance protein At1g61300 147 322 - -
Lapu9g00451 921 Pfam Rx N-terminal domain 6 88 IPR041118 -
Lapu9g00451 921 CDD RX-CC_like 3 129 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00451 Lapu-Chr9 4844012 4847527 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00451 607 837 Receptor kinase-like Gene Family AT3G47090 26.337 1.64e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00451 - - gmx:100305356 1493.02