Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00449 ATGGCTGCATCATATGCCAGACTTACGGTAACAGCTTTGGTGCTGATAGCTTTGGCTCCAACGTTTCTCCAATCTTCAGCTTCAGCTTCATCTGTGGGTAAATTCGTTGACGAAACCATCAATTCCCACACGATCGTCATTTTCTCCAAGACCTATTGCCCGTACTGTAACAGAGCAAAAGCTGTTTTCAAAGAGTTGAACCAGGTTCCACATGTTGTTGAGCTTGATGAGAGAGAGGATGGTTCAAAGATTCAGGAGATCTTGATTAATATTGTTGGGAAGCGTACTGTGCCACAAGTTTTCATTAATGGACAACACCTTGGAGGCTCAGATGATACCCTTGCATTTTACGAGAGTGGACAGCTGCATAAACTTCTAGGAATCAAGGAAGAGGGTCATGATGATCTATGA 411 0.4331 MAASYARLTVTALVLIALAPTFLQSSASASSVGKFVDETINSHTIVIFSKTYCPYCNRAKAVFKELNQVPHVVELDEREDGSKIQEILINIVGKRTVPQVFINGQHLGGSDDTLAFYESGQLHKLLGIKEEGHDDL* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00449 136 SUPERFAMILY Thioredoxin-like 34 127 IPR036249 -
Lapu9g00449 136 Gene3D Glutaredoxin 23 127 - -
Lapu9g00449 136 ProSiteProfiles Glutaredoxin domain profile. 33 133 - -
Lapu9g00449 136 FunFam Glutaredoxin 2 27 131 - -
Lapu9g00449 136 PRINTS Glutaredoxin signature 104 117 IPR014025 -
Lapu9g00449 136 PRINTS Glutaredoxin signature 90 103 IPR014025 -
Lapu9g00449 136 PRINTS Glutaredoxin signature 45 63 IPR014025 -
Lapu9g00449 136 Pfam Glutaredoxin 45 106 IPR002109 -
Lapu9g00449 136 NCBIfam glutaredoxin 45 126 IPR011899 -
Lapu9g00449 136 ProSitePatterns Glutaredoxin active site. 47 62 IPR011767 -
Lapu9g00449 136 CDD GRX_GRXh_1_2_like 45 125 - -
Lapu9g00449 136 PANTHER GLUTAREDOXIN 2 17 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00449 Lapu-Chr9 4829900 4833298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00449 36 126 Miscellaneous Gene Families AT4G15700 32.967 7.72e-12 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00449 K03676 - gmx:100777703 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00449 9 4829900 4833298 Lapu9g00449 9 4829900 4833298 ECH