Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00430 ATGGTGGTGAGGATTCGGCTCTCGCGGTTCGGATGCAAGAATAAACCGTTCTATCGGGTCATGGCTGCTGATAGCAGATCTCCCAGAGATGGCAAACATCTTGAAGTTCTCGGTTACTATAATCCCTTACCAGGTCAAGATGGTGGCAAGAGAATGGGTCTCAACTTCGAAAGGGTGAAGTATTGGCTGTCTGTTGGAGCTCAGCCTTCAGAGCCTGTGGAACGGCTTCTATTCAGAGCTGGGGTACTGCCCCCGCCACCTATGGTGGCAATGGGGCGTAAAGGTGGACTGCGTGATACTCGCCCTGTCAATGCTCTAACTGGACGTGTGCTAAATCAAGAGAAGCCGGCTAATGAGAAGAACGATGACCATGAACATGAGGCTGCTGAAAACCCTTTTTAG 402 0.5075 MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVERLLFRAGVLPPPPMVAMGRKGGLRDTRPVNALTGRVLNQEKPANEKNDDHEHEAAENPF* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00430 133 MobiDBLite consensus disorder prediction 107 133 - -
Lapu9g00430 133 FunFam 30S ribosomal protein S16 1 107 - -
Lapu9g00430 133 MobiDBLite consensus disorder prediction 115 133 - -
Lapu9g00430 133 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lapu9g00430 133 Gene3D - 1 132 IPR023803 -
Lapu9g00430 133 PANTHER 30S RIBOSOMAL PROTEIN S16 1 127 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lapu9g00430 133 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lapu9g00430 133 NCBIfam 30S ribosomal protein S16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lapu9g00430 133 SUPERFAMILY Ribosomal protein S16 3 95 IPR023803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00430 Lapu-Chr9 4561994 4563571 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00430 K02959 - gmx:100305630 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00430 9 4561994 4563571 Lapu9g00430 9 4561994 4563571 ECH