Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00420 ATGGGTGATAGCAGTGTTCCATCTGGGTCTCCAAATCCAAAACCAGATCTTGTTGATGGGGACTCAGTGGTTTCCAATAACGCTTCATTGGAAACCATTGTGCAAAGTTTCCAAGATTCAATGTCTCTTGGTAAGAGACATAAGTTTTGGGAAACACAACCTGTTGGGCAATACAAGGATGTTGGGGACGCAAGTTTGTCTGAAGGCCCCATTGAGCCCCCAACACCTTTGTCTGAGGTTAAGCAGGAGCCTTATAACCTTCCTAGTGCTTATGAGTGGACCACATGTGACATGGACTCTGCGGAAACCTGTGATGAGGTTTATGTTCTGCTGAAGAATAACTATGTTGAGGATGATGAAAACATGTTCAGGTTCAACTATTCCAAAGAATTTCTCAGGTGGGCTTTGCGCGTTCCGGGGTATTACCGGAGTTGGCACATTGGTGTGCGTGCCAAGGCCTCGAAGAAGTTGGTTGCTTTCATCAGTGGCGTCCCAGCAAGGATTAGAGTTAATGAGGAGGTTGTGAAGATGGCTGAGATCAATTTCTTGTGTGTTCATAAGAAGCTCAGGTCGAAGAGGCTTGCGCCTGTTATGATAAAGGAGGTCACCAGGAGGGTTCATTTGGAGAATATTTGGCAAGCGGCTTATACAGCAGGGGTTGTGCTTCCAACACCAATCACGACTTGTCAGTATTGGCACCGATCGTTGAATCCGAAGAAGCTAATTGATGTTGGGTTTTCAAGGCTTGGTGCTAGGATGACGATGAGTCGCACAATAAAACTTTATAAATTGCCGGATTCCCCGGTTACTCCTGGATTCAGGAAAATGGAGCTCCGGGATGTGCCTGCTGTTACTAGACTGCTTAGAAACTACTTGAGCGAGTTTGTTGTTGCACCTGATTTTGATGAAAATGATGTTGAGCACTGGCTACTTCCCAATGAGAATGTGGTGGATAGTTTCTTGGTGGAGAGTCCGGGGAATCATGAGATAACTGACTTCTGCAGCTTCTATACTCTCCCTTCTTCGATTCTTGGAAATCAAAATTACTCAACTTTGAAAGCTGCTTATTCTTATTATAATGTCTCCACCAAAACCCCATTGACTCAGTTGATGAATGATGTGCTAATTGTAGCAAAGCAAAAGGATTTTGATGTTTTCAATGCCTTGGATGTAATGCACAATGAGAGTTTCCTCAAAGAGCTCAAGTTTGGACCGGGAGATGGACAGCTTCACTACTACTTGTACAATTATAGGATTCGTAATGCCTTGAAACCATCTGGACTTGGGCTTGTGCTTTTGTAG 1302 0.4424 MGDSSVPSGSPNPKPDLVDGDSVVSNNASLETIVQSFQDSMSLGKRHKFWETQPVGQYKDVGDASLSEGPIEPPTPLSEVKQEPYNLPSAYEWTTCDMDSAETCDEVYVLLKNNYVEDDENMFRFNYSKEFLRWALRVPGYYRSWHIGVRAKASKKLVAFISGVPARIRVNEEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSPVTPGFRKMELRDVPAVTRLLRNYLSEFVVAPDFDENDVEHWLLPNENVVDSFLVESPGNHEITDFCSFYTLPSSILGNQNYSTLKAAYSYYNVSTKTPLTQLMNDVLIVAKQKDFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYRIRNALKPSGLGLVLL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00420 433 Gene3D - 39 433 - -
Lapu9g00420 433 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 402 408 IPR022678 GO:0004379
Lapu9g00420 433 PANTHER N-MYRISTOYL TRANSFERASE 33 433 IPR000903 GO:0004379|GO:0006499
Lapu9g00420 433 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 70 229 IPR022676 GO:0004379
Lapu9g00420 433 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 231 433 IPR016181 -
Lapu9g00420 433 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 179 187 IPR022678 GO:0004379
Lapu9g00420 433 PIRSF N-myristl_transf 11 433 IPR000903 GO:0004379|GO:0006499
Lapu9g00420 433 FunFam Glycylpeptide N-tetradecanoyltransferase 44 215 - -
Lapu9g00420 433 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 243 421 IPR022677 GO:0004379
Lapu9g00420 433 FunFam Glycylpeptide N-tetradecanoyltransferase 39 433 - -
Lapu9g00420 433 MobiDBLite consensus disorder prediction 1 24 - -
Lapu9g00420 433 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 45 230 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00420 Lapu-Chr9 4463298 4466690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00420 1 433 Acyl Lipid Metabolism Gene Families AT5G57020 83.410 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00420 K00671 - gmx:100787291 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00420 9 4463298 4466690 Lapu9g00420 9 4463298 4466690 ECH