Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00418 ATGGAGTGCGTAGCGGCCAGAAACTTGGCGGCAATGGCGTTTTGGGTGAGTCCTTCGTCGAGGTTGAGGTTGCGGAGGAAGAAGCTGTGGAGAAGACGAACAGCGTTGTGCGGCCATGGTGTTCGGTGGCGCTCGCGGTGGCTGAAGGTGGAGGCGAACGCAGGGAGCGAGAGTTGCGTGGCCACCAAAGAGGACTTCGCCGATGAGGAGGATTACGTGAAGGCCGGTGGCTCCGAACTCGTTTTCGTACAAATGCAACAAAACAAAGCCATGGAAATGCAATCCAAGCTCGTGGATAAGTTGCCACCTATAGGAGATGATATACTGGATCTAGTTGTGATTGGTTGTGGTCCTGCTGGTCTTGCTCTGGCTGCTGAATCGGCCAAGTTGGGACTAAAAGTTGGGCTTATTGGTCCGGATCTTCCTTTTACAAATAATTATGGTGTGTGGGAGGACGAATTTAGAGGTCTCGGACTTGAAGGTTGCATTGAGCATGTTTGGAAAGATACCATTATCTATCTCGACAATAAGGACCCCATTTTTATTGGGCGTTCTTATGGACGTGTCAGTCGGCATCTGCTTCATGAGGAATTGTTAAGCAGGTGTGTCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAAAGTATTATTGAGGCGAGCAATGGTCATAGTCATGTTGTCTGTGAATATGATATTGTAGTTCCCAGCAGGCTTGTTACTGTTGCATCAGGAGCTGCTTCGGGGAAACTGTTGCAATACGAGGTCGGCGGTCCAAAGGTTTCTGTCCAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAAGGTCTAGAAGCAAATTATCCAACATTTCTTTATGCAATGCCCATGTCCCGTACAAGAGTGTTCTTTGAGGAAACCTGTTTAGCTTCAAAAGATGCGATGCCTTTTGATTTATTAAAGAAGAAGCTCTTTTCGAGATTAAATTCAATGGGGATCAGAATTACTAAAACTTACGAAGAGGAATGGTCTTATATCCCAGTTGGCGGATCCTTACCGAACACAGAACAAAAGAACCTTGCATTTGGTGCAGCCGCCAGCATGGTGCATCCAGCCACAGGGTACTCCGTTGTGAGATCTTTGTCAGAAGCTCCACAATATGCTTCAGTAATTGCTACTATTTTGAAAGATGGCCATGCCAAGGACATTATTACCCTAGAAAGAAGAAAGGAGAATCTATCTATGCAAGCTTGGAATACACTTTGGCCACAAGAAAGGAAACGGCAGAGGGCATTCTTTCTTTTTGGATTAGCTCTAATTCTGCAGCTGGACATAGGGGGAATTCGAACATTCTTTCGTACTTTCTTCTGCTTACCTGATTGGATGTGGCAGGGATTTCTTGGCTCCTCTCTATCCTCTACAGATCTTGTATTATTTGCTTTCTACATGTTCATAATAGCACCAAATAACTTGAGAATGTGTCTAGTCAGACATCTGCTTTCAGATCCTACCGGTGCAACCATGATAAAGACTTACTTAGCGGATAATCTTTTCTGGTTTAAGAATAGATAA 1617 0.4471 MECVAARNLAAMAFWVSPSSRLRLRRKKLWRRRTALCGHGVRWRSRWLKVEANAGSESCVATKEDFADEEDYVKAGGSELVFVQMQQNKAMEMQSKLVDKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFRGLGLEGCIEHVWKDTIIYLDNKDPIFIGRSYGRVSRHLLHEELLSRCVESGVSYLSSRVESIIEASNGHSHVVCEYDIVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQNVQGLEANYPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNSMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPQYASVIATILKDGHAKDIITLERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIGGIRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMCLVRHLLSDPTGATMIKTYLADNLFWFKNR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00418 538 NCBIfam lycopene cyclase family protein 110 509 IPR010108 GO:0016117|GO:0016705
Lapu9g00418 538 PRINTS Pyridine nucleotide disulphide reductase class-I signature 110 132 - -
Lapu9g00418 538 PRINTS Pyridine nucleotide disulphide reductase class-I signature 240 249 - -
Lapu9g00418 538 PANTHER - 27 528 - -
Lapu9g00418 538 Pfam Lycopene cyclase protein 110 507 - -
Lapu9g00418 538 SUPERFAMILY FAD/NAD(P)-binding domain 108 503 IPR036188 -
Lapu9g00418 538 FunFam lycopene epsilon cyclase, chloroplastic 106 449 - -
Lapu9g00418 538 Gene3D - 109 447 IPR036188 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00418 K06444 - gmx:100788180 973.385