Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00412 ATGGGGGAAGAGGTGAGTGTCACTGTTTTGCATAACGGAAACAATGGAAACGAAGATCAGAACCTGGAATTTGACATTTATCCTTTGAGTAGTTACTATTTTGGATCCAAAGACCCCATTCCCTTCAAAGACCTCACTCTACATCATCACCTTCTCAGGATCCAATCCAACTATGCTGCACGTGGATTGCGAACTTCTGTGGAGGCTGTCTTACTGGTTGAATTGTTCAAACATCCACACTTGTTGGTTTTGCAATTAAGAAATTCCATCTATAAACTTCCGGGTGGTAGATTAAGGCCAGGTGAATCAGATACTGATGGATTGAAGCGTAAGCTGTCAAGAAAACTTTGTGTTGATGAAGATGGAGATGGGTCAGAATGGGAGGTGGGTGAATGCCTCGGAATGTGGTGGAGACCTGATTTTGAAACATTATTGTATCCTTTCTTGCCACCCAATGTAAAACAGCCAAAGGAGTGTACAAAAGTCTTCCTTGTGAAGTTGCCTGCTAGTCGAAAGTTCATTGTACCCAAGAACATGAGGTTGCTTGCAGTTCCATTGTGCCAAGTTCATGAAAATCACAAGACATATGGGCAAATAATAGCAGGGGTTCCACAGCTTCTGTCAAAATTCTCTTTCAACATGATGGAATCTTGA 654 0.4205 MGEEVSVTVLHNGNNGNEDQNLEFDIYPLSSYYFGSKDPIPFKDLTLHHHLLRIQSNYAARGLRTSVEAVLLVELFKHPHLLVLQLRNSIYKLPGGRLRPGESDTDGLKRKLSRKLCVDEDGDGSEWEVGECLGMWWRPDFETLLYPFLPPNVKQPKECTKVFLVKLPASRKFIVPKNMRLLAVPLCQVHENHKTYGQIIAGVPQLLSKFSFNMMES* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00412 217 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 23 214 - -
Lapu9g00412 217 Pfam Nucleotide hydrolase 24 210 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lapu9g00412 217 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 19 216 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lapu9g00412 217 FunFam Pre-mRNA cleavage factor Im subunit 2 22 214 - -
Lapu9g00412 217 PIRSF CPSF-25 3 217 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lapu9g00412 217 SUPERFAMILY Nudix 62 119 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00412 Lapu-Chr9 4354894 4357974 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00412 K14397 - gmx:100791216 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00412 9 4354894 4357974 Lapu9g00412 9 4354894 4357974 ECH