Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00387 ATGGTGGCCATGGCCAGCACCGCCAATAGAAGAATAGAAACATACGGAGAGTTCGCGAAAGTTCACGCACTGCTACTTGCGGCGTCGGGGTTGCCGGAGTGCCTGCACCGGCGGCTCTTCGAGAAGCTCTCCGGAGAGTCCTTCGACGGTGGCAACCACTTCCAGATCGAGCCATGCGAGGATGGCCGTCAGCGGCGCCTTGTTCTAACGTCGGCGTCGATGGGGATGGACTCCGACGTCTTCCTCGTCGATCACGCCTGGACTTTCAGACTCTCCGACGCATACAAGCAGCTGCGTGAGGTTCCAGGATTGGCTGAGAGAATGGGTTCTCTGATGTGTGTGGATGTTGATGTGAGATGTGATGATGGTGAAGCTGAAGGGAACAGTGAGCTTGGTGTTGAGGAAACTTTGGAGAGTGAAGTTGGTGAGGCAAAGGTGAAAGGAGATGGGACGTTACGGTGGTTGGAGCTTGAAGGGCTTAACATTGATGATGCCATGCTTGTGTCTCTAGCCTTACAAACTAGGTTTCCGGATTTAGTGGCACTTAGCCTGCTTCGAAACAAGCTCAATAGCGCCGAGGTGGTTGTTCAGGAAGTTATCAAATTTAAGCATCTCAAAGGAATATGGCTCAACAATAACCCAGTTCTTAAAAATTGTGATGGTAAGCTTGCAGCGGTGATTCTTAAGGAGTTGCCAGAACTGGAAATTTATAATTCAAGTTTCACAAGCAATTTTGGGGAGTGGGCCTTGGGCTTTTGTGCAGGGATATATGGAAAGGATAACCCTGTAAATGCTGATCAGGCTCACACTCCACTGCACACTGTGTCTTCTCTTGACCTTTCAAATAGGAACATTCACAACTTAAAGAATAAGGCATTTACCCCCTTTTGTTTGCCATCTCTTACGTACTTGAACATTCAAGGAAATCCATTAGAGCAGAACTCCGTTGGTGACTTGTTAGATCTGCTGCGGAGATTCCCTTGTTTGCGATCATTGGAGGTGGATATTCCAGGTCCACTTGGACGAAGGGCCATTGAAATTCTGGAATCTCTTCCAAACATTTCTGAGCTAAATGGTATCAATGCATCCAAAATATTGGAAACGGGAAAGCATGTTATTGATTCAATGCTTCTTCCTCGTCTTCCTGAATGGACTGTTGACGAGCCTCTTGCTGATCGTATCATAAATGCAATGTGGCAATATCTAATGACATATAGACTTGCAGATGAAGAAAAGTTAGATGAAACATCAGTATGGTATGTGATGGATGAGCTAGGTTCAGCTTTGCGGCATAGTGATGAGCCAAATTTCAGAGTGGCTCCATTTTTGTTCATGCCAGAGGGCAATCTAGCATCAGCTGTGAGCTTTTCTATTCTATGGCCAATACAGAATGTTCAGAAAGGTGATGAGTGCACACGCGACTTTCTTCTTGGTATTGGGGAAGATAAACAACGTTCCGCCCGGCTTACTGCATGGTTCCACACTCCAGAAAACTACTTTGTCCAGGCATATGAGAAGCACCATCTGAAATTGTTGTCCACAAGTTTAGTATCTCCCACCTGTCAGTATTCTGAGACTCGAAGTATTCATCAAGATGGTGGGCGTCCGTTGCGTGTTTACACTGACATACCTCAAGTAGAGGAATACTTGACACATCCCGAGTTTGTAATCACAAATGAACCAAAAGGTGCAGCAGATATAATATGGACAAGTATGCAGGTAGATGAGGACATGAAGAAAGCTACGGGAATTACGGATCAGCAATACATTAATCAATTTCCTTTTGAAGCATGTCTTGTTATGAAGCATCATTTAGCAGAGACAATTCAAAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTTGAAACACACCTATCTCAACTTATTGGCGACTATTGTGTTCGCAAAAAGGAAGGACTAGACAATCTTTGGATCTTAAAACCCTGGAACATGGCCCGAACCATTGATACTACTGTAACTGACAATTTGCCTGCAATAATCCGGCTCATGGAAACTGGTCCCAAAATTTGCCAGAAGTATATTGAACAGCCTGCATTGTTCCAGGGTAAAAAGTTTGATCTCCGTTACATAGTACTGGTTCGGAGCATGCATCCTCTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATAGCCAACAATCAATATTCTTTGGCCAGAAGTAGTTTATTTGAGTATGAAACTCATTTCACTGTTATGAATTATCGCGGAACAATAAATCATAAGAATGCTAACGAATTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACACACAAGAGTTAGGAAAATGATTCGATCGGTATTCGAGGCAGCTGCTGTTGCTCATCCCGAGATGCACAGTCCAACATCAAGGGCAATGTATGGTGTAGATGTCATGTTGGACAGCTCTTTCCACCCTAAGTTACTGGAGGTGACTTACTGCCCGGATTGTACAAGAGCTTGCAAATATGACATGGATATTGTGGTTGGAGAGGGAGGCGTTGCCAAAGGTTGTGATTTCTTCAACAATGTGTTCAGGTGTCTCTTTCTTAATGAAACTTCACAAGTTAGTCAATTGTAA 2610 0.4418 MVAMASTANRRIETYGEFAKVHALLLAASGLPECLHRRLFEKLSGESFDGGNHFQIEPCEDGRQRRLVLTSASMGMDSDVFLVDHAWTFRLSDAYKQLREVPGLAERMGSLMCVDVDVRCDDGEAEGNSELGVEETLESEVGEAKVKGDGTLRWLELEGLNIDDAMLVSLALQTRFPDLVALSLLRNKLNSAEVVVQEVIKFKHLKGIWLNNNPVLKNCDGKLAAVILKELPELEIYNSSFTSNFGEWALGFCAGIYGKDNPVNADQAHTPLHTVSSLDLSNRNIHNLKNKAFTPFCLPSLTYLNIQGNPLEQNSVGDLLDLLRRFPCLRSLEVDIPGPLGRRAIEILESLPNISELNGINASKILETGKHVIDSMLLPRLPEWTVDEPLADRIINAMWQYLMTYRLADEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPIQNVQKGDECTRDFLLGIGEDKQRSARLTAWFHTPENYFVQAYEKHHLKLLSTSLVSPTCQYSETRSIHQDGGRPLRVYTDIPQVEEYLTHPEFVITNEPKGAADIIWTSMQVDEDMKKATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYCVRKKEGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNQYSLARSSLFEYETHFTVMNYRGTINHKNANEFVREFEEEHQVKWLDIHTRVRKMIRSVFEAAAVAHPEMHSPTSRAMYGVDVMLDSSFHPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKGCDFFNNVFRCLFLNETSQVSQL* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00387 869 Gene3D - 663 843 - -
Lapu9g00387 869 ProSiteProfiles TTL domain profile. 532 861 IPR004344 GO:0036211
Lapu9g00387 869 SUPERFAMILY RNI-like 152 358 - -
Lapu9g00387 869 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 8 868 IPR027749 -
Lapu9g00387 869 Pfam Tubulin-tyrosine ligase family 587 837 IPR004344 GO:0036211
Lapu9g00387 869 Gene3D Ribonuclease Inhibitor 128 244 IPR032675 -
Lapu9g00387 869 Gene3D Ribonuclease Inhibitor 259 364 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00387 K16609 - gmx:100809212 1562.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00387 9 4114471 4120292 Lapu9g00387 9 4114471 4120292 ECH