Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00336 ATGTTAGCTTCTTCTCTCTCCTTCCTCCATTCCTGCGCATTCCCTTCTTCTTCATCCTCTTCCTTATCCACAATTTCACAACCAAACCCCAAAACTTTCATGGTTGAAGCCAAAGTCAGGACCCGCAGGGAAGACAGAACCGCACGCCACACTCGCATCAGAAAGAAGGTTGAAGGGACACCCGAGAGGCCGAGGTTGTCAGTGTTCCGATCCAACAAGCACCTCTCTGTGCAGGTGATTGATGACACCTCGATGCGCACGCTTGCTTCGGCTTCCACAATGCAGAAGACCATTGCTGAAGAGTTTAATTACTCCGCTGGCCCCACAGTTGAAGTTGCAAAGAGGATGGGTGAGATCATTGCAAAGTCCTGTTTGGAGAAGGGAATCACAAAGGTGGCCTTTGATCGAGGGGGATACCCATACCATGGTCGTGTTCAAGCACTTGCTGAAGCAGCTCGTGAACATGGCCTAGATTTCTAA 480 0.5 MLASSLSFLHSCAFPSSSSSSLSTISQPNPKTFMVEAKVRTRREDRTARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTSMRTLASASTMQKTIAEEFNYSAGPTVEVAKRMGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALAEAAREHGLDF* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00336 159 Hamap 50S ribosomal protein L18 [rplR]. 41 159 IPR004389 GO:0003735|GO:0005840|GO:0006412
Lapu9g00336 159 NCBIfam 50S ribosomal protein L18 43 159 IPR004389 GO:0003735|GO:0005840|GO:0006412
Lapu9g00336 159 CDD Ribosomal_L18_L5e 53 157 - -
Lapu9g00336 159 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 41 159 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lapu9g00336 159 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 36 159 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lapu9g00336 159 Gene3D - 41 159 - -
Lapu9g00336 159 SUPERFAMILY Translational machinery components 42 157 - -
Lapu9g00336 159 FunFam 50S ribosomal protein L18 40 159 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00336 K02881 - gmx:100778569 273.478