Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00333 ATGGAGGATCAACCATCATCATCAAAATCAAAAACTGCTGTTTTGGATCCACCCCTTCATTCAATGGGGTTTGAAATTGAAGAACTATCACCACAAAAAATCTCTGGCCGTCTCCTTGTTACCCAGAAGTGCTGCCAGCCATTTAAGGTGCTTCATGGAGGGGTTTCAGCATTGATAGCAGAGTCTTTGGCAAGCATGGGAGCACACATGGCTTCTGGGTATAAAAGAGTGGCTGGAATTCAACTAAGCATCAACCATTTGAAACGAGCTGAGATGGGTGACTTGGTGCAGGCTGAAGCTACACCTTTGAATGTTGGCAAAACAATTCAGGTGTGGGAGGTGAGACTCTGGAAGATTGATCCTTCAAACTCAAAAAACATATCCCTGGTTTCATCTTCTAGGGTAACTCTAGTAACAAATATGCCTGTCCCAGATCACGCAAAAGATGCAGCTGAACCATTAAAGAAGTTTGCAAAACTTGGTTCACATAACCCGTCACAGAAAACTCTCAGCCTCAGATAA 522 0.4349 MEDQPSSSKSKTAVLDPPLHSMGFEIEELSPQKISGRLLVTQKCCQPFKVLHGGVSALIAESLASMGAHMASGYKRVAGIQLSINHLKRAEMGDLVQAEATPLNVGKTIQVWEVRLWKIDPSNSKNISLVSSSRVTLVTNMPVPDHAKDAAEPLKKFAKLGSHNPSQKTLSLR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00333 173 CDD PaaI_thioesterase 22 117 - -
Lapu9g00333 173 Gene3D Hotdog Thioesterase 4 140 - -
Lapu9g00333 173 FunFam 14-dihydroxy-2-naphthoyl-CoA thioesterase 1 5 140 - -
Lapu9g00333 173 NCBIfam hotdog fold thioesterase 21 116 IPR003736 -
Lapu9g00333 173 Pfam Thioesterase superfamily 49 120 IPR006683 -
Lapu9g00333 173 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 16 123 IPR029069 -
Lapu9g00333 173 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 2 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00333 Lapu-Chr9 3436813 3441961 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00333 K19222 - gmx:100527403 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00333 9 3436813 3441961 Lapu9g00333 9 3436813 3441961 ECH