Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00315 ATGGCGGCTTCTGATCCCAACAAGTTGCTCTCCAAAGCTGATAAGCTAACAACACTCAGTCTCACGAGGTGGAGTGCGGATTGGAAAAGTGCTACTGCTCTTTATGAGCAGGCAGCTAATGGGTTTCGAGTTTCCAGGAACTATGAGAAAGCCAAAATAGCATATGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCATCACCTTGGGATGCAGCTAAGCACATGGAATCTGCCGCCGCTTTGGCAAAGGATCTAAGTAACTGGCAGGAAGTTGGGGACTTCTATCGAAGGGCATCTGAGTTGTACATGGAGTGTGGGAGACCACAACCTGCATCAGATGCCCTTGCAAAGGGGGCTCGTGCTTTGGAAGATAGCATGTCTGAAGAAGCTATTCAGCTATATACAGATGCTTGCACAATTCTTGAAGATGATGGAAGAGAACAAATGGCCTTTGACCTATATCGTGCTGCCGCTAATGTTTATATAAAACTTGAAAAATATACAGATGCAGCATCTTTCATGTTGAGATTGGGCTTGGCTGCTGACAAGTGTAATGCTACCAATAGCCAGAGCAAGGCGTATCTTAGTGCAATTGTTATCTACCTCTATGCTCATGACTTTAATCAAGCCGAGAAGTGCTATAATGACTGTTCTCAGATTGATGCTTTTCTTAGAAGTGACCAGAATCGTTGTGCTAGCAAGCTACTTGCAGCCTACACAGATGGAGACGTTGAAGAAATCAAACGTATTGCTCAGTCGAGTGGTATTTCACATCTTGACCATGTGATTATTAAGCTTGCGAGGAAACTTCCAACAGGTGATGTGAGTGCATTAAAGGCTGACAATGCTGCTGAAGATGAGCCACTTGATGAAGACGACCTGACTTAA 888 0.4414 MAASDPNKLLSKADKLTTLSLTRWSADWKSATALYEQAANGFRVSRNYEKAKIAYEKASKGQEMLSSPWDAAKHMESAAALAKDLSNWQEVGDFYRRASELYMECGRPQPASDALAKGARALEDSMSEEAIQLYTDACTILEDDGREQMAFDLYRAAANVYIKLEKYTDAASFMLRLGLAADKCNATNSQSKAYLSAIVIYLYAHDFNQAEKCYNDCSQIDAFLRSDQNRCASKLLAAYTDGDVEEIKRIAQSSGISHLDHVIIKLARKLPTGDVSALKADNAAEDEPLDEDDLT* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00315 295 Gene3D Tetratricopeptide repeat domain 2 272 IPR011990 GO:0005515
Lapu9g00315 295 Pfam Soluble NSF attachment protein, SNAP 5 264 - -
Lapu9g00315 295 FunFam Gamma-soluble NSF attachment protein 3 272 - -
Lapu9g00315 295 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 275 IPR000744 GO:0006886
Lapu9g00315 295 SUPERFAMILY TPR-like 7 249 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00315 K21198 - gmx:100776112 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00315 9 3176716 3184684 Lapu9g00315 9 3176716 3184684 ECH