Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00312 ATGGCCTCAGAAAATGGAGAGAAAGTTGAGGTTGGTTTGAGTGCAGTTCCAGAGACAAAGCCAAAAAAGAAGGATTGGGTTGTTTTGTCCCTGAGAGTGGTTGCGTTTTTGGCCACTGCATCTGCAACGCTTGTGATGGCTCTCAACAAACAGACCAAAAGCTTCGTAGTTGCCACCGTTGGTAGCACCCCAATAACAGCAACTCTTGCTGCAAAGTTCAACCAAACTCCAGCTTTTGTGTTCTTTGTTGTAGCCAATGCAAACGCGAGTCTGCATAACTTGGTGATGATAGCAATGGATGTATTAGGACCCCAATGTGATTACAAAGGACTCAGGCTTGTGCTCATTGCAATTTTAGATATGATGGCTATGGCTCTGGCATCAGCTGGAGATGGTGCAGCAACATTCATGTCTGAATTGGGAAAAAATGGTAATTCACATGCGAGATGGGATAAGATATGTGACAAATTCCAAACCTACTGCAACCGAAGTGCTGCTGCCCTTGTTGCCTCTTTCATTGGCTTCATTCTCCTCCTCATTATTTCAGTCATGTCCATCATCAAACTGCTCAAGCCAAATCGCATTAACCATGCTTCTCCATAA 603 0.4428 MASENGEKVEVGLSAVPETKPKKKDWVVLSLRVVAFLATASATLVMALNKQTKSFVVATVGSTPITATLAAKFNQTPAFVFFVVANANASLHNLVMIAMDVLGPQCDYKGLRLVLIAILDMMAMALASAGDGAATFMSELGKNGNSHARWDKICDKFQTYCNRSAAALVASFIGFILLLIISVMSIIKLLKPNRINHASP* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00312 200 NCBIfam plant integral membrane protein TIGR01569 29 189 IPR006459 -
Lapu9g00312 200 PANTHER CASP-LIKE PROTEIN 1U1 20 189 IPR044173 -
Lapu9g00312 200 Pfam Casparian strip membrane protein domain 23 177 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00312 Lapu-Chr9 3157521 3159711 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00312 - - gmx:100792043 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00312 9 3157521 3159711 Lapu9g00312 9 3157521 3159711 ECH