Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00308 ATGGAAGTGTCATCGGAGCCGTCTGGCGAAGATGTGGCGCCTGAAAAGCCTCTGAGTTCTCCGAAGAAGCACGCTCCAGAACCTTCCAGGAGAGCTACGAAAACCGCCGCGGACATTGGCGGTGCGGCGAAAAGGAAAGTTGAACCGCGAACCGGTTCGAGTACCGGTTCCGGTGCGGTTGCAGCGAGGAGATCGGGTTCAATCGGCGGTTCCGCGAGTTCGGTTTCAATCGGCGGTTCCGCGAGTTCGGTTTCTGCGCCGAGACGGAACAGTACCGGAGGATTGTCTCAGAAGTCGTCGATCTCTTCTGGAGGGAGAAAAACCGGTGCTGAGTCTGTTGGTGGAGTTAAGAGCAGCGTTTCGTCGGCGAGTGAACCTATTCGGAAGTCACTGCCGGAGCTCCGGCGTAATTCTGCAACTTCTTCACGTGCCGGCGCTGCGGCGAATCCGGTTGCGGCCTCCTTGGTTGGCTCGGCTTCTAGGACTTCTGGTGTGAGTAAGGCGGAGGTTGCGAGGAAGCCGGTGAGTAAGCCGGCATTGTCGGCTTCGGCTTCGGCTTCGTCTGTTTCGAGAAGGATTAGTTCTTCGTCGGTGGATAGCACTGCCAGCAGTGGAGGTTCTGCTCGAAGGACGGTTTCCAGGGTTTCTTCGCCGACGGTTTCCAGCGGGTTGAAGGCGGGCTCTTTGTCGACGTCGCAGGATAGAGCTTCTGCACTGTCTGGAAGGAGGAAGGGAGGGACTCCTGATAGCCGGGATTCGCGGTTTATTGTGCTTCCGCAGGTTGAGATTAAGGCCAATGATGACTTGAGACTTGATCTAAGGGGACACAGAGTTCGCAGTCTCACTGCCAGTGGATTAAACTTATCCTCAAACTTAGAGTTTGTTTATCTCCGGGACAATCTCTTGTCTACACTGGAAGGAGTAGAAATATTGACGCGAGTGAAGGTTCTTGATTTGAGTTTTAATGATTTTAAGGGGCCTGGATTTGAGCCTCTTGAGAATTGCAGAGTACTTCAGCAACTCTATCTTGCTGGAAATCAAATTACATCGTTGGCAAGTCTCCCTCAACTTCCTAATTTAGAGTTCCTTTCAGTAGCTCAGAATAAGTTGAAGTCTCTCACTATGGCTAGCCAACCTCGACTGCAGGTCTTAGCTGCCAGCAAAAACAAAATTTCTACTCTTAAGGGTTTCCCATATTTACCTGTTCTTGAGCATTTGCGAGTGGAGGAAAATCCTATACTCAAGATGCTTCATTTGGAAGCAGCCTCAATATTACTAGTTGGACCTACTTTGAAAAAGTACAATGACAGAGATCTTTCTCGTGAGGAAGTGGCACTAGCAAAGCGTTATCCTGCACATACAGCCTTATGCATTAGAGATGGTTGGGATTTCTGTCGCCCTGAGCAAGCTGCAGAGTCTACTTTCTGCTTTTTAGTTGAGAAATGGGAAGATCATATCCCTCCGGGTTTTCTTCTCAAAGAAGCCTCCATAGATAAACCTGTGGAAGAAGATGTATGTCGTTGCCACTTCACTGTTATTCATGATGGTGCAGCTAGTACAGGCCCTCCATTAGATTTAAAGTATCAATGGTTTTGTGGTGATTTATCGCTTTCAAATTTTGTCCCTATTCCAGATGCTACCAGTGAGGTTTACTGGCCAAAGCATGATGACATTGGAAAAGTTCTGAAAGTGGAATGCACCCTCACTTTAGAAGAAATGGCATATCCTCCTATATTTGCAATCTCATCTCGTATTTCACGAGGGAATGGAGTTCCAAAGGTTGTAAATCTTGAAGTACAAGGGGAACTGGTAGAAGGAAGTATCATCAGGGGTTGTGCTAAGGTTGCTTGGTGCGGTGGAACGCCAGGAAAAGGTGTTGCTAGTTGGTTACGGAGAAAGTGGAACAGCAGTCCTGTGGTCATTGTTGGGGCAGAAGATGAAGAGTATAAGTTAACCATTGATGATGTTGATTCAAGTTTAGTTTTCATGTACACACCAGTAACAGAAGAAGGTGCAAAAGGAGAACCTCAATACAAATATACAGATTTTGTAAAAGCTGCTCCTCCTTGTGTCAGTAATGTGAAAATAGTTGGAGATGCTATTGAGGGATGTACCATCAAAGGAGTCGGGGATTACTTTGGTGGAAGGGAGGGTCCAAGCAAGTTTGAATGGTTGCGGGAGAGCATGGATTCTGGAGGTTTTTTGTTAGTGTCTGCAGGTACATCCGAGTATACCTTGACCAAAGAGGATGTTGGTCATTGTTTGGCTTTTGTGTACATACCCATTAATTTTGAAGGCCAGGAAGGAAAATCTATGTCTGTAATGTCTCCTGTTGTGAAACAAGCACCTCCAAAGGTAACAAATGTCAAAATAATTGGTGATCTACGAGAAAATAGCAAGGTCACTGCAACTGGTGTTGTAACTGGAGGAACTGAAGGATCTAGCAGAGTTCAGTGGTATAAAACATATTTGTCAACTTTAGATGAAAACAGTCTTGAAGTATTAAGTACTTCCAAAATTGCCAAAGCATTCCGCATACCTCTTGGAGCTGTTGGCTATTACATTGTGGCAAAATTTGTGCCCATGACTCCCGATGGTGATTCTGGAGAACCAGTGTTTGTAATATCTGATAAAGCAGTTGAGACTCTTCCCCCAAGCTTGAATTTCTTATCTATCATTGGAGATTACAATGAAGATGGAATTTTAACAGCTTCATATGGATATGTTGGAGGTCATGAAGGAAAGAGTATATACAGTTGGTATATTCATGAGGTTGAAGGTGATTCAGGTTCTCTCATACCGGGGCTTTCAGGACTGCAGTACCATATTACCCAAGAAGCTATTGGAAAATTCATCTCATTCCAGTGTACTCCGGTACGGGATGATGGTGTTGTGGGTGACATAAGAATTTGCATGGGCCAGGAGCGCGTTCGCCCTGGAAGCCCAAGATTGCTTTCTCTCCACATAATTGGAAATGCTGTTGAAGGAACAGTTCTAAGAATTGAAAAAAAGTATTGGGGTGGTGAAGAGGGAGATTCAGTTTACCGCTGGCTTAGGACCACTTCTGATGGCACAAAAAAAGAAATTGCGGGTGCAACTGCTGCATCGTATATGCCCTCAATTGATGACATTGGCTCCTTTATTTCTGTTTCATGTGAGCCTGTCCGAAGTGATTGGGCTCGTGGACCTATGGTATTGTCTGAACAAATTGGGCCTGTAATACCTGGTCCCCCAACATGTCATTCTCTGGAATTTTTTGGATCTATGATAGAAGGGCTGCACTTAAGCTTCAATGCTGTGTATACTGGAGGGGAGCAAGGAGATTGTACCCATGAGTGGTTTAGGGTAAAAGATAATGGAGTGCGAGAGAAAATAAGTAGCAATGACTATTTGGATTTGACACTTGAGGATGTTGGTGCGTGCATTGAAATAATCTATACTCCTGTGCGCAAAGATGGAACCAAAGGCAGCCCAAAGCGCATCGTGTCTGATCTAATTTCTCCTGCGGATCCTAAGGGAATAGAACTTTTAATTCCCGATTGCTGTGAAGACAGAGAGCTTATGCCACTGAGAAAATATTTTGGTGGACATGAAGGGGCTGGAGAGTATATTTGGTATCAGACAAAGCGTAAACTTGAAGGATCTGAACTGCTAGACATATCTAATGCTTCTGATGTTGTAATATGTGGGACAGAGCTAATGTATAAACCGTTGCTTAAAGATGTTGGAGCGTACTTGGCTTTGTATTGGGTGCCTACAAGGGCAGATGGCCAATGTGGGGAGCCATTGGTTGCGATTAGCAGTACCCCAGTTTCCCCTGCTCCTCCAGTAGTTTCTAATGTACACGTGAAAGAGTTGTCTTCCGGAATTTATTCTGGAGAAGGGGAATATTTTGGTGGACATGAAGGAGAAAGTCTCTTTAGCTGGTATAGAGAAAATAATGAGGGAACCATTGAACTAGTAAATGGGGCAACTTCTAAAACCTATGAAGTTACTGATTCTGATTACAATTTTCGATTGTTGTTTGGATATACACCTGTTCGTTCAGATTCAGTTGTGGGAGAGCTCATTTTATCTGCTCCAACTGATGTTGTGTTCCCCGAGCTTCCATGTGTGGAGATGCTTGCTCTGACTGGAAAGGCAATTGAAGGCGATGTTCTTACAGCTGTTGAAGTGATTCCAAATAGTGAGGCTCAGCGACATGTTTGGAGCAAGTACAAGAAAGATATAAGATACCAATGGTTTTGTTCGTCAGAAGTTGGAGACAGTTTTTCATATGATCCATTACCTAATCAGAGTTCTTGCTCCTATAAGGTGCGGCTAGAGGATATTGGTCATCATTTAAAATGTGAGTGTATAGTAACTGATGTGTTTGGAAGGTCAGGTGAGGCAGTATGCATTGAGACAACTGCTGTATTGCCAGGAATTCCTAGAATACACAAGCTTGAGATTGAGGGAAGGGGATTTCATACAAATCTTTACGCTGTTCATGGCATTTACAGTGGTGGAAAGGAAGGTAAAAGTAGAGTTCAGTGGCTTAGATCAATGGTTGGAAGTCCAGACCTGATCTCCATACCTGGAGAAACTGGCAGAATGTATGAAGCGAATGTTGATGATGTTGGCTATAGGCTGGTGGCCATCTATACTCCTGTGAGAGAGGATGGAGTAGAGGGACAATCAATTTCAGTATCCACAGAGCCAATTGCAGTTGAGCCCGATGTTCTTAAAGAAGTGAAGCACAATCTTGAACTTGGATCAGTGAAGTTTGAGGTATTATGTGACAAAGACCAAAACTCAAAAAAGATTTCATCAGTGGGCACGTATGAGAGACGTATCCTTGAAATTAACAGGAAAAGGGTCAAGGTGGTAAAGCCTGCCACGAAGACTTCTTTTCCAACTACAGAACTTCGTGGTAGCTATGCCCCTCCCTTTCATGTGGAGCTTTTCAGGAATGATCAACACCGTCTCAAGCTTGTAGTGGACAGTGATAATGAAGCAGACTTGATGGTGCACTCCCGACACATTCGGGATGTTATTGTTCTTGTGATTCGAGGACTTGCTCAGCGATTCAATAGTACTTCCCTCAATTCCCTTCTCAAGATCGACACGTAA 5112 0.4472 MEVSSEPSGEDVAPEKPLSSPKKHAPEPSRRATKTAADIGGAAKRKVEPRTGSSTGSGAVAARRSGSIGGSASSVSIGGSASSVSAPRRNSTGGLSQKSSISSGGRKTGAESVGGVKSSVSSASEPIRKSLPELRRNSATSSRAGAAANPVAASLVGSASRTSGVSKAEVARKPVSKPALSASASASSVSRRISSSSVDSTASSGGSARRTVSRVSSPTVSSGLKAGSLSTSQDRASALSGRRKGGTPDSRDSRFIVLPQVEIKANDDLRLDLRGHRVRSLTASGLNLSSNLEFVYLRDNLLSTLEGVEILTRVKVLDLSFNDFKGPGFEPLENCRVLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLTMASQPRLQVLAASKNKISTLKGFPYLPVLEHLRVEENPILKMLHLEAASILLVGPTLKKYNDRDLSREEVALAKRYPAHTALCIRDGWDFCRPEQAAESTFCFLVEKWEDHIPPGFLLKEASIDKPVEEDVCRCHFTVIHDGAASTGPPLDLKYQWFCGDLSLSNFVPIPDATSEVYWPKHDDIGKVLKVECTLTLEEMAYPPIFAISSRISRGNGVPKVVNLEVQGELVEGSIIRGCAKVAWCGGTPGKGVASWLRRKWNSSPVVIVGAEDEEYKLTIDDVDSSLVFMYTPVTEEGAKGEPQYKYTDFVKAAPPCVSNVKIVGDAIEGCTIKGVGDYFGGREGPSKFEWLRESMDSGGFLLVSAGTSEYTLTKEDVGHCLAFVYIPINFEGQEGKSMSVMSPVVKQAPPKVTNVKIIGDLRENSKVTATGVVTGGTEGSSRVQWYKTYLSTLDENSLEVLSTSKIAKAFRIPLGAVGYYIVAKFVPMTPDGDSGEPVFVISDKAVETLPPSLNFLSIIGDYNEDGILTASYGYVGGHEGKSIYSWYIHEVEGDSGSLIPGLSGLQYHITQEAIGKFISFQCTPVRDDGVVGDIRICMGQERVRPGSPRLLSLHIIGNAVEGTVLRIEKKYWGGEEGDSVYRWLRTTSDGTKKEIAGATAASYMPSIDDIGSFISVSCEPVRSDWARGPMVLSEQIGPVIPGPPTCHSLEFFGSMIEGLHLSFNAVYTGGEQGDCTHEWFRVKDNGVREKISSNDYLDLTLEDVGACIEIIYTPVRKDGTKGSPKRIVSDLISPADPKGIELLIPDCCEDRELMPLRKYFGGHEGAGEYIWYQTKRKLEGSELLDISNASDVVICGTELMYKPLLKDVGAYLALYWVPTRADGQCGEPLVAISSTPVSPAPPVVSNVHVKELSSGIYSGEGEYFGGHEGESLFSWYRENNEGTIELVNGATSKTYEVTDSDYNFRLLFGYTPVRSDSVVGELILSAPTDVVFPELPCVEMLALTGKAIEGDVLTAVEVIPNSEAQRHVWSKYKKDIRYQWFCSSEVGDSFSYDPLPNQSSCSYKVRLEDIGHHLKCECIVTDVFGRSGEAVCIETTAVLPGIPRIHKLEIEGRGFHTNLYAVHGIYSGGKEGKSRVQWLRSMVGSPDLISIPGETGRMYEANVDDVGYRLVAIYTPVREDGVEGQSISVSTEPIAVEPDVLKEVKHNLELGSVKFEVLCDKDQNSKKISSVGTYERRILEINRKRVKVVKPATKTSFPTTELRGSYAPPFHVELFRNDQHRLKLVVDSDNEADLMVHSRHIRDVIVLVIRGLAQRFNSTSLNSLLKIDT* 1704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00308 1703 ProSiteProfiles Leucine-rich repeat profile. 337 358 IPR001611 GO:0005515
Lapu9g00308 1703 PANTHER EXPRESSED PROTEIN 663 772 - -
Lapu9g00308 1703 FunFam 187-kDa microtubule-associated protein AIR9 983 1066 - -
Lapu9g00308 1703 FunFam 187-kDa microtubule-associated protein AIR9 isoform X2 1370 1465 - -
Lapu9g00308 1703 FunFam 187-kDa microtubule-associated protein AIR9 886 970 - -
Lapu9g00308 1703 SUPERFAMILY Outer arm dynein light chain 1 270 421 - -
Lapu9g00308 1703 FunFam Predicted protein 240 420 - -
Lapu9g00308 1703 MobiDBLite consensus disorder prediction 16 31 - -
Lapu9g00308 1703 Gene3D - 983 1061 - -
Lapu9g00308 1703 Gene3D - 511 575 - -
Lapu9g00308 1703 Gene3D - 1370 1466 - -
Lapu9g00308 1703 Gene3D - 886 967 - -
Lapu9g00308 1703 MobiDBLite consensus disorder prediction 180 238 - -
Lapu9g00308 1703 ProSiteProfiles Leucine-rich repeat profile. 291 312 IPR001611 GO:0005515
Lapu9g00308 1703 MobiDBLite consensus disorder prediction 1 252 - -
Lapu9g00308 1703 Gene3D Ribonuclease Inhibitor 262 327 IPR032675 -
Lapu9g00308 1703 Gene3D Ribonuclease Inhibitor 328 455 IPR032675 -
Lapu9g00308 1703 MobiDBLite consensus disorder prediction 50 107 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00308 - - pvu:PHAVU_009G217700g 3048.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00308 9 3060914 3100161 Lapu9g00308 9 3060914 3100161 ECH