Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00304 ATGGAGGAGGAAGCGGAAGAAACGAAAAACGCAGTGAGAATTTTCGTCGGAGGATTGGCGGAAGCCGTCAGCGCCGAAGATCTTAGAAGCTTATTCTCGTCTCTGGGCACCGTCCAAGCCGTTCAAACCATCCGAACCAAAGGCCGCAGCTTTGCCTACATCGATTTTCACTCCAACCCTAAATCCCTTTCCAAGCTCTTCAGCAAGTATAATGGGTGTCTGTGGAAGGGTGGAAGGCTGAGACTGGAGAAAGCCAAAGAAGACTATCTCGCGCGGTTGAAGAGAGAATGGGAGCATGACGCTGTTGATGATGCTACTCAACCACCCCCTAGTTCCCCTAAGGAAACCACCACACACTCTTCCAAGTCAAATACCAAACATCTCAATATTTTCTTTCCCAGATTGAGAAAGGTGAAATCCATACCATTCAGTGGAACTGGCAAGCACAAATACAGTTTTCAGAATATTAAAGTTCCGCCACTCCCTGTGCATTTTTGTGATTGTGAGGAGCATTGTAGTCCTTTTGTCACTGAAAGAGGGAAGCTATCTATTGATGGGGCAACCGAAAGTGGTGGAATGAATGATGAAGAGATTAGCATAATGAATGCTGTGATGAACAAGCTACTTCAAAAAGAAAAAGTTTCCAGTGAGGAGAACTTTGGAAAGGAGAAGGATTCTTATGAATCACCTGATGCTTTGCAATCTGATGAACGTGAAGATAGTGCAACGGATGAAGATGATCTCATTATTAACATGGAGACGAAGAAAAATAAAACAGCTTTAACAGGGATCCAGGAACTTGAAAGAATCCTGGAAAATCAGGAATCACGGTTGAATAAAATAAACATTGCTAAGGAAGAATCCAACAAGAGTTTACCTCAACTGGAGAAAAGGAATAATAGCAATCCCAACAAGAACAAGAAGAGGAAATCACTTCCCAAATTGGAAATGGAAAGCAATCCAGAAGTATCAACAACCCCTGGAGGCAAGGGTAATATGCAGACCCTTCCAAATAAGGTGGGATCTGGTGCACAGTCGAGTGAGCCAGAAGATGGTTTGGAGGAGTTGACTAAAGTTTCATGGTCTCAGAAGTCTTCATGGAAAGAACTTCTTAGTGGCGGAGGCAATACTTCTTTCAGTGCTTCTCTCATATTGCCAAAGTTAGACTCTAGTAAGAATCAACAAAGATCTGATGATCTGTGTGCACCTGTATCTACAGACAACCAGACTGAAAACATGGAAAATGACGGACACTTATTGAGCAACCCTACCAATACACAGGTGATAAAAGAGCTTGCTGAAGCTCAACCTACCAATAAACAAGTGATAGAAGATGTTACCGAAAATCAGCATAATGTGGCACCTAATAAGACAGGCAGAGGAGCTTCATGGCTGCAAAAACAATCCTGGACACAAATGGTTAGTGAGAACAACAATTCATTTAGCATTTCACATATTTTGCCTGGTATTACTTTCCTAGAGCCAACGGCCAAGGAGCCCATTGTGGAACCTGCCATTTCCAACTATTGCAAGCATAATGGTGTAGCTAAGGGTACTACTAATGAAGTTGTGAGTGATGGGTTTAAATCAAGGGAGACTATACCAGAAAAGAGTCAGCATATCGGTGCCAATGACATTTCTTTTGCTTCAGTAGTTGAGGAAAAAGTTGAAACTAGTCCCAGGGAAAATTCCATTGAAAATATTGAAATAGGCGAAACATGCTCATTTATGAGAAGTGCTGCATCTTTGAAGGAATGGGCAAAAGCTAAGGCCGTTATTAGTGGATCACTCAAAAGAAAAAGTGATGTGAAGTAA 1815 0.4209 MEEEAEETKNAVRIFVGGLAEAVSAEDLRSLFSSLGTVQAVQTIRTKGRSFAYIDFHSNPKSLSKLFSKYNGCLWKGGRLRLEKAKEDYLARLKREWEHDAVDDATQPPPSSPKETTTHSSKSNTKHLNIFFPRLRKVKSIPFSGTGKHKYSFQNIKVPPLPVHFCDCEEHCSPFVTERGKLSIDGATESGGMNDEEISIMNAVMNKLLQKEKVSSEENFGKEKDSYESPDALQSDEREDSATDEDDLIINMETKKNKTALTGIQELERILENQESRLNKINIAKEESNKSLPQLEKRNNSNPNKNKKRKSLPKLEMESNPEVSTTPGGKGNMQTLPNKVGSGAQSSEPEDGLEELTKVSWSQKSSWKELLSGGGNTSFSASLILPKLDSSKNQQRSDDLCAPVSTDNQTENMENDGHLLSNPTNTQVIKELAEAQPTNKQVIEDVTENQHNVAPNKTGRGASWLQKQSWTQMVSENNNSFSISHILPGITFLEPTAKEPIVEPAISNYCKHNGVAKGTTNEVVSDGFKSRETIPEKSQHIGANDISFASVVEEKVETSPRENSIENIEIGETCSFMRSAASLKEWAKAKAVISGSLKRKSDVK* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00304 604 Coils Coil 257 291 - -
Lapu9g00304 604 MobiDBLite consensus disorder prediction 100 123 - -
Lapu9g00304 604 SUPERFAMILY RNA-binding domain, RBD 3 87 IPR035979 GO:0003676
Lapu9g00304 604 MobiDBLite consensus disorder prediction 109 123 - -
Lapu9g00304 604 Gene3D - 1 90 IPR012677 -
Lapu9g00304 604 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 59 IPR000504 GO:0003723
Lapu9g00304 604 MobiDBLite consensus disorder prediction 318 345 - -
Lapu9g00304 604 CDD RRM_NOL8 13 86 IPR034138 -
Lapu9g00304 604 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 87 IPR000504 GO:0003723
Lapu9g00304 604 MobiDBLite consensus disorder prediction 214 251 - -
Lapu9g00304 604 MobiDBLite consensus disorder prediction 284 357 - -
Lapu9g00304 604 PANTHER TRANSCRIPTIONAL REGULATOR 2 601 - -
Lapu9g00304 604 MobiDBLite consensus disorder prediction 214 237 - -
Lapu9g00304 604 MobiDBLite consensus disorder prediction 285 300 - -
Lapu9g00304 604 SMART rrm1_1 13 83 IPR000504 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00304 - - vum:124830427 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00304 9 3030578 3034642 Lapu9g00304 9 3030578 3034642 ECH