Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00302 ATGGCTTGCGTGAAATTGGGTTCCAAAGCTGATGCTTTCCAGCGTCAAGGGCAGGCCTGGTTCTGCACGACTGGGCTTCCTAGTGATATAGTAGTTGAAGTTGGAGAGATGTCCTTCCATCTTCACAAGTTTCCTTTGCTCTCTAGAAGTGGGGTTCTGGAAAGAATGATTGCTGAGGCTTCTGAATCAGAGGAAGAATGTCTCATATCCCTCAGAGACATTCCTGGTGGTGCCAAAACATTTGAACTTGTGGCAAAATTCTGCTATGGTGTGAAACTTGAACTTACAGCATCAAATGTTGTGTACCTCTGGTGTGCCGCAGAGCGTCTAGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCACAGGCTGAAACCTTTTTCAATCAAGTGGTCCTCCGCAGTTGGAAAGACTCTCTGAGAGCACTTCAAACCTGTGATAATGTTTCTGACCATGCTGAAGAGCTCCACATTGTGAAAAGATGCATTGAGTCACTAGCAGCAAAGGCGTCTACTGACCCAAATTTATTTGGGTGGCCAGTGCTGGAGCGTGGTGGTCCTTTGCAGAGCCCTGGTGGAAGTGTATTGTGGAATGGAATAAGTACAGGCGCAAGACCGAAAAATTCGAGTGCAGATTGGTGGTATGAGGATGTATCAAATTTGAGTTTACCACTGTATAAGAGATTAATAGCTGTCATGGAATCTCGAGGCATTAGGCAGGAGATTATTGCCGGTTCTCTTGCTTTCTATGCTAAAACATATCTGCCTGGGTTAAATCGACGTCAGGTTTCTGGTGAGTCCAGCACCCGTTTGACACAGGTAGCTATGGGGTCTCCATTATCTGAAGATGACCAGAAGATTCTACTGGAAGAGATTGATGGTTTGCTTCCAATGCAGAAGGGCCTGGTCCAAACAAAGTTCTTGTTTGGTCTACTTCGAACAGCTATGATTCTACGAGTGAACCCCTCTTGCATATCTAATTTGGAGAAACGAATTGGCATGCAGCTTGACCAAGCTACTCTAGAAGATCTCTTAATGCCAAATTTCTCATATTCTATGGAGACACTTTACAATGTTGAGTGTGTGCAAAGAATTCTAGACCATTTCCTTGCCATGGATCAGGTTACTGACTGTGGCTCTCCATGCTCAATTGACGATGGTCAATTGATTGGATCGCCATCATTGACACCAATCACCATGGTAGCCAAGCTAATTGATGGTTACCTTGCAGAGGTTGCCCCAGATATTAATTTAAAACTTCCTAAGTTTCAGGCCCTTGCTGCAGCAGTTCCAGAGTATGCCCGGCCTTTAGATGATGGTTTATATCGCGCATTAGATATTTACTTGAAGTCTCACCCATGGTTGGTGGAGTCCGAGAGAGAGCAGCTATGTAGGCTGATGGATTGCCAGAAGCTCTCATTAGAGGCATGCACCCATGCGGCGCAGAACGAGAGGCTACCGATCCGAATAATTTTTCAAGTTCTATTTTTCGAGCAGCTCCAGCTTCGGACGTCGATAGCAGGTTGCTTTCTAGTTTCGGATAATCTGGATGGATCGAGGCAGTTGAGAAGTGGTTTTGTTGGATCTACAGAGGGTGGCTGGGCTTCAGCCGTGAAGGAAAATCAGGTTTTGAAAGTGGGAATGGATAACATGAGGATGAGGGTGTCTGAGCTGGAGAAGGAGTGTTCAAACATGAGGCAGGAGATTGAGAAATTGGGTCGTTCAAAGGGATCAAGCGCTTGGGGAACTGTTTCTAAGAAACTTGGATTTAAGATGAAGTCTCAGATGTGTAGTGCTCAAGAAGGATCAGTTAGCAACCAGAACAATGCAAATAGTAAGGTTGAGAAGTTGAAGGAAAGACATGTAAAGCACAAGAAAAGTTCTTCTATTAGTGACAAGGCATCGGTTTCTTCAATTGTTCATTCATAG 1932 0.4457 MACVKLGSKADAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERMIAEASESEEECLISLRDIPGGAKTFELVAKFCYGVKLELTASNVVYLWCAAERLEMTEEYGEGNLISQAETFFNQVVLRSWKDSLRALQTCDNVSDHAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSADWWYEDVSNLSLPLYKRLIAVMESRGIRQEIIAGSLAFYAKTYLPGLNRRQVSGESSTRLTQVAMGSPLSEDDQKILLEEIDGLLPMQKGLVQTKFLFGLLRTAMILRVNPSCISNLEKRIGMQLDQATLEDLLMPNFSYSMETLYNVECVQRILDHFLAMDQVTDCGSPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDINLKLPKFQALAAAVPEYARPLDDGLYRALDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIFQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGFVGSTEGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGRSKGSSAWGTVSKKLGFKMKSQMCSAQEGSVSNQNNANSKVEKLKERHVKHKKSSSISDKASVSSIVHS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00302 643 SUPERFAMILY POZ domain 16 114 IPR011333 -
Lapu9g00302 643 Gene3D Potassium Channel Kv1.1; Chain A 11 131 IPR011333 -
Lapu9g00302 643 SMART BTB_4 28 121 IPR000210 GO:0005515
Lapu9g00302 643 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Lapu9g00302 643 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Lapu9g00302 643 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
Lapu9g00302 643 PANTHER OS12G0117600 PROTEIN 22 609 IPR043454 -
Lapu9g00302 643 MobiDBLite consensus disorder prediction 600 643 - -
Lapu9g00302 643 Pfam NPH3 family 213 478 IPR027356 -
Lapu9g00302 643 Coils Coil 542 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00302 Lapu-Chr9 3009664 3014362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00302 8 631 EF-hand Containing Proteins AT3G44820 46.697 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00302 - - gmx:100779836 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00302 9 3009664 3014362 Lapu9g00302 9 3009664 3014362 ECH