Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00277 ATGGACGAGTCGTGGAGAATGCGAATGGGGCTTACGCCGGGGCTCCCTCGCCGCCGATCCATGGAGGACCGCTCCGCCTCCCGCACGCGCCGCTCCATCTTCTTCGCCGCCACCACCGAGGCGGAAACCCTCGACCCCGACGACTTTGCCGACGTCTTCGGAGGCCCACCGAGGAGCCTCCTTGCGCACAAGTTCTCCAGGTCCAATTCCTTCTACGAAGAGATTTTCCGACCGCCGGAATTCGCGTCTCCGGCGAAGGCGAAGGGTGGCCGGAGCTTGCCAGTATTCCGGATTCCAGCGAAGAACGAGGCGTTTTACAGCGACATATTTGGGTCGGACGATGACCGGCGGTCGCGGGAGCGGTCGGGGCCGCAGTCGAAGGCGAAATCGAAGTCGAATTCGTCGTCGGCGCTGAGTTCCGAGGAGCTGAGCCCTCTCCGGCCGGCTATCGGTGATGACGTGGCATTATCTGCCTTTGCTTCTAAGCTCAGTGATTGTTTCAGGCCAATCAATGTCCCATGCAGATGGAACTCAACCACTATGATGCCTGGGGAACACCCAATTAAACAAGGGGGGCCACTTTTTCCATTCAATAATCAGTCATTTGAAATTCATTGTCAGGATAATGAGTACAAGGAGAGCTTCAAGAGTCCTCATTTGGGATTCTCACGAAGAGTCTCCTCCCCAGAGACAATTAGTCTCGAATCCAATTCATACCAAAGCATGAAGGTATCCGCTGATGACTGGGAACTCAGTTCCCCGTTTTCTGCGGTCTCTGGGCTTTGTCAAGAACCTGAGGCAAAATCTTCAGTTCATGATTATATTCTTCCAGAACTGGTTGTAGAACAGGACGATGATGAAGTTATGAGCTCATATGTCATAGAGGTCAACTCCAACCTCAGAGAGGAAAGTTGTGGAACAGCAGACATTGATGAAGCAATAGCATGGGCGAAGGAGAAGTTTCAATCACGAAATTCTGATGAAGAATCAAGCTTGAGAAATGAAGGCAATGAACTAACTACAGGGGTGGAAGGAAGATCCGATGCTGGTCAATGCCCTAATGATGAAACGGGAAACATTAAATCTTCGAAGGGACAGACAGAAACTGAGAAGTTGGACCGAGATATAAGATTTTGGTCATCTGGCAAGGAAACGGACATTCGGCTACTCCTTTCAACACTGCATCATATTTTATGGCCCGAGAGTGGCTGGTATGCTGTTCCTTTTCCGAACCTAATAGAAAGTTCACAAGTGAAGAAGGCCTATCAGAAAGCAAGATTATGCCTCCACCCTGACAAACTGCAGCAAAGAGGAGCAACACTCCTACAGAAGTATATAGCAGAGAAGGCTTTCTCCATTCTTCAGGATGCATGGACTGCATTCATTTCTGAAGACGTTTCCTTCTAA 1407 0.5025 MDESWRMRMGLTPGLPRRRSMEDRSASRTRRSIFFAATTEAETLDPDDFADVFGGPPRSLLAHKFSRSNSFYEEIFRPPEFASPAKAKGGRSLPVFRIPAKNEAFYSDIFGSDDDRRSRERSGPQSKAKSKSNSSSALSSEELSPLRPAIGDDVALSAFASKLSDCFRPINVPCRWNSTTMMPGEHPIKQGGPLFPFNNQSFEIHCQDNEYKESFKSPHLGFSRRVSSPETISLESNSYQSMKVSADDWELSSPFSAVSGLCQEPEAKSSVHDYILPELVVEQDDDEVMSSYVIEVNSNLREESCGTADIDEAIAWAKEKFQSRNSDEESSLRNEGNELTTGVEGRSDAGQCPNDETGNIKSSKGQTETEKLDRDIRFWSSGKETDIRLLLSTLHHILWPESGWYAVPFPNLIESSQVKKAYQKARLCLHPDKLQQRGATLLQKYIAEKAFSILQDAWTAFISEDVSF* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00277 468 Gene3D DnaJ domain 362 466 IPR036869 -
Lapu9g00277 468 MobiDBLite consensus disorder prediction 1 26 - -
Lapu9g00277 468 SUPERFAMILY Chaperone J-domain 366 464 IPR036869 -
Lapu9g00277 468 MobiDBLite consensus disorder prediction 109 144 - -
Lapu9g00277 468 CDD DnaJ 416 458 IPR001623 -
Lapu9g00277 468 MobiDBLite consensus disorder prediction 325 368 - -
Lapu9g00277 468 MobiDBLite consensus disorder prediction 127 142 - -
Lapu9g00277 468 FunFam J-domain protein required for chloroplast accumulation response 1 363 466 - -
Lapu9g00277 468 MobiDBLite consensus disorder prediction 109 126 - -
Lapu9g00277 468 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00277 Lapu-Chr9 2723528 2727125 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00277 - - gmx:100801416 808.52