Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00270 ATGGCCAAACTGAAGATAGGAGGAGCATGGGCAGGGGTGGTGGAAGAGGTGGACCTCCACGCCTGGACCCTCGCCATGCTCCGCGACCGCGTCGCCGAGCGATCCAACTCGCCCTCTCATTCCATCAACCTTATCTGCGCCGGCAAGATTCTCCAAGACGACGCCGTTCCTCCGCAAACCCTTTCCCAACTCGGTATAAAAAACAACGCTAAGATCCTCGCCATGCGCGCCTCCTCTCCGCAGCAGGGACTCTCCCTCCTCGCGCAGGAAGAGCGCTGCTCCAGACTCGCGCGTATCAGGGCTGCTGCGACTGCGATGGCGGAGCGCCACGCGGATGGTGAGTTGCCGGTTGAGGACTTCAATATCGAAGTTGAGGATCAGAGTGGACAGAAAGTGCGGTTAGGCTCTGAGACTGATCAAAGGGCAGTGATGATGGGACTGATGCTTCACGCTAAGGGGAAGAAACTTATCAAACAGGGGAACTACAAAGATGCGCTGGAAGTGCTTAGCATGGGAGAGGAGTCATTCTCTCTTTGTGATCCAAAAGTCATTGAGCTGATTGACAATGTTCCTATACTACAAATAGACATGGTATGGTGCTATTTTATGATACGAGATATCAGATGGCTTGCAGACGCGGGAAAGCGTCTTGAAATAGCTAGGATAGGACTTGAACGGGCTCATGGAAAGGATTCTCTTCGCCTAAGGCTCTTACAAGGTGGTCGATTTCCAGAACTTGCATTGCATTTGAGACTAGAGCTGCTTGAAGGGGTGGTGGCATATCATACTGGGCAGTTTGAGAAATCCAGAAAAGCATTAGCCTCTGCAAGAGCTAAGTTTGTCCAGCTGCAAGTGTCAGATGAAGCCTTATCATTTGTTATGAGCATGGGCTTTGTTGAACGTGATGCAAAGCGAGCATTGTGGATGAGCAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGCTGAGGAGAAAGCCAAAAAATTGCAGAAGCGGGAGGATGATATTCGGAGAAGAAATGAAATTAAGGAACAAAAGCGGTATGGAATGACACCCTTAAAGAGAGCTGTGGATCTAGAGAGATTGAAGGAATTGGTCTCTATTGGGTTTAACAAGGAGCTTGCTGCTGAAGCCCTTAGACAAAATGAAAATGATACTCAGAAAGCTTTGGATGATTTGACGAATCCTGAAACTAGTTCTGCTTTACAGGTTACGATCGAGTCAAGGAAAAGGAAGAGAAAGAAACAAGCAAAAGATTCTGAAATTGAAAAAGTTGTGCAAATGGGTTTTGAAAGAGCAAGAGTGGTTGCTGCTTTTGAGGCCGGAGGTAGTTTAGAACAAGTTTTGCAAAGACTGACAGCACAACCTGAGACCGAACACACATCAGCTTCCACAAATACACATTCAACGGCCGCTCCCGATGGTGGTGCAAGTTCATCTGCTCCACTACCTGACAATGTTAATTCTGGTAATCTACACACGATGAATGAGGTTGAAGACATTAAAACACGACGAGATATAGAAATGGAAGATGAGCTCTCAGCAGATATTGCAAAAGCAGATGCCTTGGCTGATTATGACATTGAAGTTAATGTAGAAGGAGACGCCATAACTGAGTACCTGACCCTGGTTGAGTCAGCAGGGAGTTCTGGCGCAACTGCTCCTTCCCAGTAA 1674 0.4767 MAKLKIGGAWAGVVEEVDLHAWTLAMLRDRVAERSNSPSHSINLICAGKILQDDAVPPQTLSQLGIKNNAKILAMRASSPQQGLSLLAQEERCSRLARIRAAATAMAERHADGELPVEDFNIEVEDQSGQKVRLGSETDQRAVMMGLMLHAKGKKLIKQGNYKDALEVLSMGEESFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIRWLADAGKRLEIARIGLERAHGKDSLRLRLLQGGRFPELALHLRLELLEGVVAYHTGQFEKSRKALASARAKFVQLQVSDEALSFVMSMGFVERDAKRALWMSNQDVGGAIDFLAEEKAKKLQKREDDIRRRNEIKEQKRYGMTPLKRAVDLERLKELVSIGFNKELAAEALRQNENDTQKALDDLTNPETSSALQVTIESRKRKRKKQAKDSEIEKVVQMGFERARVVAAFEAGGSLEQVLQRLTAQPETEHTSASTNTHSTAAPDGGASSSAPLPDNVNSGNLHTMNEVEDIKTRRDIEMEDELSADIAKADALADYDIEVNVEGDAITEYLTLVESAGSSGATAPSQ* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00270 557 Coils Coil 326 346 - -
Lapu9g00270 557 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 2 549 IPR039749 -
Lapu9g00270 557 MobiDBLite consensus disorder prediction 389 421 - -
Lapu9g00270 557 SUPERFAMILY Ubiquitin-like 22 77 IPR029071 -
Lapu9g00270 557 SUPERFAMILY UBA-like 278 324 IPR009060 GO:0005515
Lapu9g00270 557 CDD UBA 362 391 - -
Lapu9g00270 557 SUPERFAMILY UBA-like 353 396 IPR009060 GO:0005515
Lapu9g00270 557 Gene3D - 264 327 - -
Lapu9g00270 557 ProSiteProfiles Ubiquitin domain profile. 23 75 IPR000626 GO:0005515
Lapu9g00270 557 Gene3D - 15 83 - -
Lapu9g00270 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 284 324 IPR015940 -
Lapu9g00270 557 MobiDBLite consensus disorder prediction 389 405 - -
Lapu9g00270 557 Gene3D - 359 396 - -
Lapu9g00270 557 SMART uba_6 286 323 IPR015940 -
Lapu9g00270 557 SMART uba_6 358 395 IPR015940 -
Lapu9g00270 557 SMART uba_6 418 454 IPR015940 -
Lapu9g00270 557 MobiDBLite consensus disorder prediction 453 503 - -
Lapu9g00270 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 356 396 IPR015940 -
Lapu9g00270 557 MobiDBLite consensus disorder prediction 453 496 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00270 - - gmx:100792972 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00270 9 2635720 2640743 Lapu9g00270 9 2635720 2640743 ECH