Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00261 ATGCCATGCTTCACTCCACACCCTTCTCTCCTACTCCTTCTCACCCTTCTCCTACCTCTCTCATTTTTCTCTCTCTCCACCGCCGTAAAAACCTCTTCTTTCCATTCCCTACGTGTTCCAGATGGAGTTGAGGATGGTGGCGAGGGCGAGTACCGGAAGGTGCTACCGTGGAAAACGAGGAGATCGATGGCTGAAGATGCTCCCAGCAACACGTCTCTGATATTGGCTCAGAGAAGAACGACAAGGAAGGACCCTTCGGACAACTTTAACCGTTACACCGGTGGTTGGAATATCAGCAATCGCCACTACATTGCTTCAGTTGTTTTCACTGCGGTTCCCTTCTTTGTTGTTGCTGCGGTCTGGTTTGTGATTTTTGGGCTCAGTTTATCCATAATCTGTTTGTGTTACTGCTGTTGTCCAAGAGAGCCTTATGGTTATTCACGTTTGGCCTATGCTTTATCCTTGATCTTACTCATCCTCTTCACCGTCGCAGCAATAGTTGGATGTGTCCTTCTTTACACTGCTCAGGGGAAGTTTCACGGGAGCACCACAAGCACACTGGAATATGTGGTGAGTCAGGCTGACTTCACCGCTGAAAACCTCAGGAATGTGTCAGATTATCTTGATGCAGCTAAGAAGATTGGAGTCGATGCTGTTTTTTTGCCTGCTGATGTTCAGAAGCAGATTGACGAAGTTAAGACTAAGATTAATTCTTCTGCTGCAGAACTTTCCAGCAAGACTAAAGATAATTCAGAGACAATTCAAGATGTCTTAGATGCAATGAGACTGGCTCTGGTTATTCTTGCTGCTGTTATGCTCTTTCTTGCATTTGTTGGATTCTTATTATCAATATTTGGGCTGCAAGGTCTTGTATACTTCTTGATTCTTATTGGTTGGATTCTTGTTGCTGGCACATTTATACTTTGTGGTGTATTTCTCTTTCTTCACAATGTGGTTGGAGACACATGTGTTGCCATGGATGAGTGGGTGCAGAACCCTACTGCACAGACAGCGTTGGATGAAATTCTTCCGTGCGTAGATAATGCAACTGCCCAGGAGACCTTGACACGAACCAGGGATGTGACTCATCAACTTGTTATATTAGTTGACAACATCGTTTCCAATGTCACAAATAGAAATTTGCCACCTGCTGCTGGACCCTTGTATTACAATCAATCAGGCCCCTTGATGCCTGTTCTCTGTAATCCATTTAATCGTGACCTCACTAATCGGTCGTGTGCACCTGGGGAAGTTCCTTTGGACAATGCTGGAGAGGTGTGGAAGAACTATACTTGTGAGGTTTCTTCGTCTGGCATTTGTAAGACACCGGGTCGGATGACGCCAACCATTTACAGCCAAATGGAAGCTGCAGTGAATATAAGTTATGGCTTGTATCACTACGGTCCATTTTTGGTTGATCTACAAGACTGCACTTTCGTGCGGAAAACATTCACAGATATCAGCAACGATCACTGTCCTGGCCTGCAGACAAATAGTGAATTGATTTATATTGGATTGGTTTTGGTATCTGCTGCTGTAATGCTGTCTTTGATCTTCTGGGTCATCTATGCAAGGGAACGGCGGCACCGGGTTTATACTAAACAGTTCATTGACGGCTAA 1620 0.4488 MPCFTPHPSLLLLLTLLLPLSFFSLSTAVKTSSFHSLRVPDGVEDGGEGEYRKVLPWKTRRSMAEDAPSNTSLILAQRRTTRKDPSDNFNRYTGGWNISNRHYIASVVFTAVPFFVVAAVWFVIFGLSLSIICLCYCCCPREPYGYSRLAYALSLILLILFTVAAIVGCVLLYTAQGKFHGSTTSTLEYVVSQADFTAENLRNVSDYLDAAKKIGVDAVFLPADVQKQIDEVKTKINSSAAELSSKTKDNSETIQDVLDAMRLALVILAAVMLFLAFVGFLLSIFGLQGLVYFLILIGWILVAGTFILCGVFLFLHNVVGDTCVAMDEWVQNPTAQTALDEILPCVDNATAQETLTRTRDVTHQLVILVDNIVSNVTNRNLPPAAGPLYYNQSGPLMPVLCNPFNRDLTNRSCAPGEVPLDNAGEVWKNYTCEVSSSGICKTPGRMTPTIYSQMEAAVNISYGLYHYGPFLVDLQDCTFVRKTFTDISNDHCPGLQTNSELIYIGLVLVSAAVMLSLIFWVIYARERRHRVYTKQFIDG* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00261 539 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 67 528 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00261 Lapu-Chr9 2543379 2550024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00261 - - gsj:114387485 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00261 9 2543379 2550024 Lapu9g00261 9 2543379 2550024 ECH
Lapu3g00769 3 8111683 8112399 Lapu9g00261 9 2543379 2550024 ECH
Lapu3g00769 3 8111683 8112399 Lapu9g00261 9 2543379 2550024 PCT