Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00163 ATGTTAAAGCAAATTCTTAGCAAATTGCCTAAGAAGGTGCCAAAATCTGACACATCAGATTCGGCCCAGAGTGATTCTGGGAGTGCTACTACTTTTGCAAATGTCTTTCAGTGTACAAATGTTGGGGTTGCCATTTCAAGCAAATTAAATGCTGTGAAGCGGGTATCATCATTGGTATTTCCAGCAAACTTGAGTGTTGGAGTGGAAGCAGTTGATCCCAATATATCTTTCAAAGATGTTTCAAATATACAGAAGCAAAACCTGTTTATCAGTAAGTTGAATCTTTGCTGCAGTGTTTATGATATAAATTGTCCTGATAAGAATTCCAAAGAGCACGATGTTAAACATCAAACATTAGTAGAGCTTGTTGATTTTGTTTCTTCTGGATCTGCAAAGTTCACAGAACCATCAATAGCTGCAATGTGTAAAATGTGTGCAAGTAATTTGTTTAGGGTTTTCCCACCTAAATTTCGTCCTAGTGCTACTGGTGGAGAAACAGAAGATGAAGAGCTCATGTTTGATCCTGCCTGGTCTCACTTGAAAATTGTTTATGATCTTCTCCTTCAATTCATAAATTATGATGCGCTCGATCTAAAGGTGGCAAAATTGCATATTGATCATGCTTTCATTGTTAGATTGCTTGACCTTTTTGATTCTGAGGACCCTAGAGAAAGAGATTGTCTAAAAACAATTCTGCATAGAATATATGGGAAATTCATGGTACACAGGCCTTTCATACGGAAATGTGTCAGCAATATCATCTACCGTTTTGTTTTTGAGACTGAACACCATAATGGAATTGCTGAGTTGCTGGAAATTTTTGGGAGTGTGATTTGTGGGTTTGCCTTGCCACTGAAGGAGGAGCACAAAATGTTTTTGTGTAGGGTTTTAATGCCTTTACACAAACCTAAATCTGTTGGTAGTTATCATCAGCAGTTAACATATTGTGTTGTAGAGTTCATTGATAAGGATCCAACACTGGCTAGCACCGTGATAACAGGGCTGTTGAAATACTGGCCAGTAACAAATAGCCAAAAGGAGCTAATGTTCATAAGTGAGTTGGAAGAGGTTTTGGATGCGACAATCATGACTGAATTTCAGAAGGTTATGGTCCCACTATTTCGGCGAATAGCTTGCTGTCTTAATAGCTATCATTACCAGGTGGCTGAACGAGCTCATTTGCTATGGAACAACGAGCACATCTTCGATGTTGTCTCTCAGAACCGGCAGGTGATTCTGCCTCTTCTGTTCACAGCACTTGTACATAACACCCAGTATCACTGGAACCGAGCAGTGCTCAACCAGACCGAGAACATGAGGAAGATGCTGTCTCAGATGGATGAGGAACTGGTGCTTGCCTGCCAACTTAAGTTGGAGGAGGAAGATTCAAGGTCAAGTGCCGCAGCTGAGCGGCGAAGGGTAACATGGGAACGTCTTGAAGCTGCTGCCATTGCCAATGTCCAACCTATAGCTGTAGTTGGTGATGTTTTAGCATCCCCTGCATGTTCAGTGGCATGCTAG 1521 0.4109 MLKQILSKLPKKVPKSDTSDSAQSDSGSATTFANVFQCTNVGVAISSKLNAVKRVSSLVFPANLSVGVEAVDPNISFKDVSNIQKQNLFISKLNLCCSVYDINCPDKNSKEHDVKHQTLVELVDFVSSGSAKFTEPSIAAMCKMCASNLFRVFPPKFRPSATGGETEDEELMFDPAWSHLKIVYDLLLQFINYDALDLKVAKLHIDHAFIVRLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPFIRKCVSNIIYRFVFETEHHNGIAELLEIFGSVICGFALPLKEEHKMFLCRVLMPLHKPKSVGSYHQQLTYCVVEFIDKDPTLASTVITGLLKYWPVTNSQKELMFISELEEVLDATIMTEFQKVMVPLFRRIACCLNSYHYQVAERAHLLWNNEHIFDVVSQNRQVILPLLFTALVHNTQYHWNRAVLNQTENMRKMLSQMDEELVLACQLKLEEEDSRSSAAAERRRVTWERLEAAAIANVQPIAVVGDVLASPACSVAC* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00163 506 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu9g00163 506 Gene3D - 82 482 IPR011989 -
Lapu9g00163 506 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 484 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu9g00163 506 FunFam Phosphoprotein phosphatase, putative 82 480 - -
Lapu9g00163 506 MobiDBLite consensus disorder prediction 1 27 - -
Lapu9g00163 506 PIRSF PP2A_B56 3 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu9g00163 506 SUPERFAMILY ARM repeat 86 464 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00163 Lapu-Chr9 1509547 1513931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00163 K11584 - gmx:100814349 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00163 9 1509547 1513931 Lapu9g00163 9 1509547 1513931 ECH