Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00123 ATGCTGGAGCGGTGCCTGGGGATGCGGCGCGTGCGCCAGATTCAGCGCGCGTGCCGGCACAGTTCGGTGACTTTCCTCTGCCTCTTCCTCACGGTCATCGTCCTCCGCGGCACAATCGGCGCTGGCAAGTTCGGTACGCCGGAGCAGGACTTCAACGAGATCCGCCACCACATCTCCGCCGCCCGCGCCCGCCGCGTCCTCGAAGAGACTAAACCGGACGCCGGTTCCAACGCCGATTCCAACGCCGATTCCAACCCTAACAACTACGCCACCTTCGATCTCTCTAAGATCCTGGTGGACGAGCCACCAACCGAGGACGAAAAGCGTGACCCTAACGCGCCCTACACTCTCGGTCCGAAAATCTCCGATTGGGATGAACAGCGCCGAACCTGGCTCCTAGCCAACCCTGAGTACCCTAACTTCATCCGACCCAACAAGCCACGTGTCCTTTTAGTGACAGGTTCGTCCCCTAAACCGTGTGAAAACCCGGTCGGTGATCACTACCTTGTGAAATCAATCAAGAACAAGATTGACTATTGCAGGGTTCATGGGATTGAGATTTTCTACAACATGGCTCTTTTGGACGCTGAGATGGCAGGGTTTTGGGCCAAGCTTCCATTGATTCGTAAACTTTTACTCTCACACCCTGAAGTGGAGTTTCTCTGGTGGATGGACAGTGATGCAATGTTCACCGACATGGCTTTTGAGGTTCCCTGGGAGAGGTACAAAGATTCCAACTTTGTTATGCATGGGTGGAATGAGATGGTGTATGATGAGAAGAATTGGATTGGGTTGAACACTGGGAGTTTTCTGTTGAGGAATTGCCAATGGTCTTTAGATATTCTTGATGCTTGGGCTCCTATGGGGCCTAAAGGGAAGATAAGGGATGAGGCTGGGAAAGTGCTCACTAGGGAGCTTAAGAATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCTATGGTTTATTTGTTGGCCACTGGGAGGGAAACATGGGGTGACAAGGTTTACCTTGAGAATCATTATTACTTGCATGGGTATTGGGGGATTTTGGTGGATCGTTATGAGGAGATGATTGAGAATTATCATCCGGGTCTTGGTGATCACAGGTGGCCTTTGGTGACCCACTTTGTGGGGTGCAAGCCTTGTGGAAAGTTTGGGGATTACCCTGTGGAGAGGTGCTTGAAGCAGATGGATAGGGCTTATAATTTTGGGGATAACCAGATTTTGCAGATGTATGGCTTCACTCATAAGAACCTTGCTAGTCGCAAGGTGAAGAAAGTGAGGAATGATACTGGCAACCCTCTTGAGATCAAGGATGAACTTGGATTGCTTCACCCTGCTTTCAAAGCTATCAAGCTTCCTTCTTCTTGA 1371 0.5055 MLERCLGMRRVRQIQRACRHSSVTFLCLFLTVIVLRGTIGAGKFGTPEQDFNEIRHHISAARARRVLEETKPDAGSNADSNADSNPNNYATFDLSKILVDEPPTEDEKRDPNAPYTLGPKISDWDEQRRTWLLANPEYPNFIRPNKPRVLLVTGSSPKPCENPVGDHYLVKSIKNKIDYCRVHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKIRDEAGKVLTRELKNRPVFEADDQSAMVYLLATGRETWGDKVYLENHYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAYNFGDNQILQMYGFTHKNLASRKVKKVRNDTGNPLEIKDELGLLHPAFKAIKLPSS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00123 456 Pfam galactosyl transferase GMA12/MNN10 family 146 385 IPR008630 GO:0016020|GO:0016757
Lapu9g00123 456 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 6 440 IPR008630 GO:0016020|GO:0016757
Lapu9g00123 456 FunFam xyloglucan 6-xylosyltransferase 2 145 296 - -
Lapu9g00123 456 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 145 299 IPR029044 -
Lapu9g00123 456 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00123 Lapu-Chr9 1138428 1140281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00123 1 456 Glycosyltransferase AT3G62720 76.522 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00123 K08238 - gmx:100818287 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00123 9 1138428 1140281 Lapu9g00123 9 1138428 1140281 ECH