Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00114 ATGTTAGACCTCAAATACATATGGGTGCTTGTTTCTATCAACAGGTTCATTCATGACACCTTGGAAGATGAGAAGACAAGGAATGGTCTAAAATTGAGATGCACCTCCAAGTTAAGGGTTCAAAAGCAGGAATTCTTTGAATTCTCTGAGCAGTCAGTGTTGTCCAATCTTTACTGGGGCATTGACAGCATTGAGGCTGCCATTCAAGCTCAACAGCCAGAAGATAGATCCTTTAGGCTAATGAACTCAGAACAAATGCTTCAGGTGCCAGCAATGCTTGATGAGGAAGAGGTCACAGCCACAATTCCAAACCGTTACTTGGTGTGCTGCTCCTACTTTTACCTCTCTGTGGTTAGGAAGCTCCAGGGAGATGAGTGGCAGGCTGCACTGCATTTTCTCCAAGCAGTGTTGGTCTCACCAAGGCTTGTTTGGACAGAATTTGCATCACAACTTTGTGAAAGTCTTTTCCCACAATCAAGCATTCCCATGACGCAGGGTAACTGTAGCAGTAGAAGTTTGGAATCTGTGTCTTCTGAGGATGAAATGGATGAAGCAATTAGGGAGGTGGCAAGGAGGTACAAGGAGTGTCTGGTGTATTACCAGGTCATGCTTTATGGAGAGACTCCGTGGTGGCGCAGTTATTGCAGCAAACAATCACCACGTTCTGTGGATGTACCAAATTCTAGCTGCGTTTCTTCAACTTCAGTTCAACATGAATCAAGAACGAAAAGTTGCAATATGTATAAAAAGGTTCATCCACTTGATTATCAAGATGTGATGCATACAATGGAACTTGAGTCAAAACAAATCATGAACATTGCTGAATATGAAGGTGACAAGAAAGCCCTCAAACAACTGAAGTCAGTTGAGTATCACGGCAAAGAGAATCAAACAATTTCAAGTATCAAATGTTTCAAAGATATGATGATAGAAGCACACTCTAAAACACCAGTATCTATGGATGCATTTTATAAAGATTTTAGAGCCAGAAAGGACATGGAAAATATGGATGACAGAAAATTTTATATACAAACCACGATAACTAAAGGAGATGATCTACCACCAGAACTCTACAACTGGAAGCTAGAACAACACTCTGTTTTGACTCAAGCTCATCAACATCCCATTCAAGAACAGTTGGACAAAAGAAACATAATTAAGCTTGATTCTAGTAGATTCAACAGGTCCATAGAAGATATTACTTTTTCTATCTCAAAATACAGAGATAAAACTGGAAATACTCCCTTAAATTGTCATGGAGAGGATGAATTAAATGAGGATGCATCGCAGCCAAAAAAATTGTTTGATCATGTAGCATTTACATCTGCTTGCAAACATAGGCCCACTCAGAAAAATCAAGAAAATTCCGAGATGCAAAGATTGCATGGTCTAGGAAAGTTTGATGAACTTTGTTCAAACTCCAGAAGATATTCCCTGCAAGACTTGTCAGAATTGACTGAAAGGAGAATTACAGAACTACATTATTCAGAGGTATTAGGAAAATGTGATGAAGAATATACTGTAGACATTGCATCAATTTATGAGAGCTTGATTAGTTCATCGGGTGCTACTTATGCCTCCTTAAAGGATGTGATTTTGGATGAGCTGCTAATAGCTATCTCTACTTCCAAAGAGGAAAGAAAAATAAGGGCATCAGTATCTATTCTTACAACAATAATTTCAAAGAACAAGTCAATCATAGAAGATGTCAAGAAGAAAGGTTTAAGGTTGTGTGATCTGGCAAGTGCTCTAAAACAAAATGTCCATGAGGCAGCAATTCTAATTTATTTAATAAATCCTTCACCTATAGATATAAAAACATTGGAACTCCTGCCAATATTGGTGGAGATTGTATGCACTTCAAATAGTTACAAGAATAGGCCAGAGTCACTTCTTTTGACACCTCATGCAGCATCGTTGATGATCATTGAAGAACTAGTAACTTCATTTGACTATGCCACAAATAACATGCATTTGGCCACCATCAGTTCTCCTCATGTTCTCAGTGGATTTCTAGAAGTTGCCAGGAATGATAATCTAGAGGAATTTTTCTCTTTAACCACCATTCTTATAAAATGCATGCAGTATGATGCCCAGTGCAGAAAGTATGTATCACAATTCACTCCACTTGCTCCCTTTATCCACCTCTTGCAGTCAGAAAACACCCGCGCCAAATGCACGGCTCTTGAATTTTTTCATGAAATCCTTTGTATACCACGATCATCTGCCATTACTCTGCTGCAACGTATACAACAAGAAAGAAACATCAATATTATGCAGATACTAATGCAGTGTGCACTTCAGTTACAACCTGATCACCAGCTTTTAGCTGCAAATATTTTGCTTCAGTTAGACATACTGAACTCTCCTGATAAAGGTGTGTTTAGAGAAGAAGCAGTGCAGATCCTTCTCAGTGCAATGACATCAGAAGAAAGCTCAGAGCAGATATTATCTGCATCCATTCTATCAAATCTTGCTGGTACATATGCTTGGACAGGAGAACCGTATACAACTGCATGGTTGTTGAGAAAGACTGGTTTGACCTCTCCCTATCACCAGAATATGATAAGGAACTTCAACTGGTTGGATCAGAGTCTACAGGATACTAGCACAGATTTCTGGTGCAGTAAAATTGCCAAATGTATTATAAGCCTTGGGGATTCTGTCTTTCATACTTTAGATAGGGTTCTTAGAAGCAAGATAAAGAGGGTTTCTAGAGATTGCCTTGTAGCAATTGCATGGCTTGGATGTCAAATATCAAAAAGTCCAGACAGCATCAGTTATTCTGCATCTGAGATTATACTAAGTGGAGTTGAGCAGTTTCTGCATCCTGGGATGGAGTTGGAGGAAAGACTTCTAGCATGTATGTGCATGTTTAATTATGCCTCAGGAAAAGGAAAGCAAAAACTAATGCATTTCTCGGAAGGAATAAAGGAATCACTAAGGCGCCTTTCAAATGTTATTTGGATGGCTGAGGAATTGCATAGAGTAGCCGATTTCTTGCTCCCGAACATATCACGTATTTCTTGCGTTCACACACAAATCCTCGAGACAGGTTGCAGCTTTAGTTTAGCAGTTTGCTCCCTCATCTACTTCAAGGGATTGCTGTTCAGTGGGTATTCAGATGGAACAATCAAGGTTTGGGATATTAGGGGGCACTCAGCCAGTCTTGTATGGGACATTAAGGAGCACAAGAAGTCCGTGACATGCTTTTCACTTTATGAACCATCTGACTGCCTTTTGAGCGGATCTACTGATAAAACCATAAGGGTGTGGAAAATGATCCAGAGAAAGCTGGAATGTGTTGAAGTTATAGTATTGAAGGAATCAATTCATCATTTGCGCGCACATGGTGAAACAATTTTTGCTATCACAGAAAGCCAGGGACTAAAGGTAGTTAATGAATCAAGAGTGACCAGAGATATTCTCAAAGGTAAGCATGTGAAGTGCATGACGGTGGCTCAAGGAAAGTTATATATTGGATGCACAGATTCAAGCATACAGGAGTATTCCACAACACACAACCGTGAACTAGAGATCAAACCCCCTACAAGGAGTTGGAGGAAGCAAAGTAAGCCCATCAATGCAGTTGTAGCATTTAGAGACTGGCTCTATAGTGCAAATAAGCAAGTTGAAGCCACAACATTCAAGGAATGGAAAAGAACTAGGAAACCAAAACTTTCAATTCTTACTGACAAAGGAGAAAACGTGGTGGCCATGGAAGTGGTAGAAGACTTCTTGTACCTAATCTCCAGCTCTTCACCAAACAACATTCAGATATGGTTGAGAGGGGCACCAAAAAAGTTGGGGAGAATATCAGCAGGAAGCAAGATAACAAGCATCCTTGCAGCCAATGACATCATTTTTTGTGGTACCGACACTGGACTAATCAAGGGCTGGATCCCTCTGTAG 3912 0.3993 MLDLKYIWVLVSINRFIHDTLEDEKTRNGLKLRCTSKLRVQKQEFFEFSEQSVLSNLYWGIDSIEAAIQAQQPEDRSFRLMNSEQMLQVPAMLDEEEVTATIPNRYLVCCSYFYLSVVRKLQGDEWQAALHFLQAVLVSPRLVWTEFASQLCESLFPQSSIPMTQGNCSSRSLESVSSEDEMDEAIREVARRYKECLVYYQVMLYGETPWWRSYCSKQSPRSVDVPNSSCVSSTSVQHESRTKSCNMYKKVHPLDYQDVMHTMELESKQIMNIAEYEGDKKALKQLKSVEYHGKENQTISSIKCFKDMMIEAHSKTPVSMDAFYKDFRARKDMENMDDRKFYIQTTITKGDDLPPELYNWKLEQHSVLTQAHQHPIQEQLDKRNIIKLDSSRFNRSIEDITFSISKYRDKTGNTPLNCHGEDELNEDASQPKKLFDHVAFTSACKHRPTQKNQENSEMQRLHGLGKFDELCSNSRRYSLQDLSELTERRITELHYSEVLGKCDEEYTVDIASIYESLISSSGATYASLKDVILDELLIAISTSKEERKIRASVSILTTIISKNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCTSNSYKNRPESLLLTPHAASLMIIEELVTSFDYATNNMHLATISSPHVLSGFLEVARNDNLEEFFSLTTILIKCMQYDAQCRKYVSQFTPLAPFIHLLQSENTRAKCTALEFFHEILCIPRSSAITLLQRIQQERNINIMQILMQCALQLQPDHQLLAANILLQLDILNSPDKGVFREEAVQILLSAMTSEESSEQILSASILSNLAGTYAWTGEPYTTAWLLRKTGLTSPYHQNMIRNFNWLDQSLQDTSTDFWCSKIAKCIISLGDSVFHTLDRVLRSKIKRVSRDCLVAIAWLGCQISKSPDSISYSASEIILSGVEQFLHPGMELEERLLACMCMFNYASGKGKQKLMHFSEGIKESLRRLSNVIWMAEELHRVADFLLPNISRISCVHTQILETGCSFSLAVCSLIYFKGLLFSGYSDGTIKVWDIRGHSASLVWDIKEHKKSVTCFSLYEPSDCLLSGSTDKTIRVWKMIQRKLECVEVIVLKESIHHLRAHGETIFAITESQGLKVVNESRVTRDILKGKHVKCMTVAQGKLYIGCTDSSIQEYSTTHNRELEIKPPTRSWRKQSKPINAVVAFRDWLYSANKQVEATTFKEWKRTRKPKLSILTDKGENVVAMEVVEDFLYLISSSSPNNIQIWLRGAPKKLGRISAGSKITSILAANDIIFCGTDTGLIKGWIPL* 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00114 1303 Pfam WD domain, G-beta repeat 1023 1049 IPR001680 GO:0005515
Lapu9g00114 1303 Pfam WD domain, G-beta repeat 1059 1093 IPR001680 GO:0005515
Lapu9g00114 1303 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1061 1094 - -
Lapu9g00114 1303 Gene3D - 993 1302 IPR015943 GO:0005515
Lapu9g00114 1303 PANTHER OS04G0584500 PROTEIN 2 1002 - -
Lapu9g00114 1303 SMART WD40_4 1223 1262 IPR001680 GO:0005515
Lapu9g00114 1303 SMART WD40_4 1007 1049 IPR001680 GO:0005515
Lapu9g00114 1303 SMART WD40_4 1054 1093 IPR001680 GO:0005515
Lapu9g00114 1303 SUPERFAMILY ARM repeat 710 981 IPR016024 -
Lapu9g00114 1303 ProSiteProfiles Trp-Asp (WD) repeats profile. 1035 1058 IPR001680 GO:0005515
Lapu9g00114 1303 Gene3D - 599 992 IPR011989 -
Lapu9g00114 1303 SUPERFAMILY WD40 repeat-like 1010 1299 IPR036322 GO:0005515
Lapu9g00114 1303 ProSiteProfiles Trp-Asp (WD) repeats profile. 1061 1094 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00114 - - gmx:100782870 2403.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00114 9 1048417 1057277 Lapu9g00114 9 1048417 1057277 ECH