Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00112 ATGTTTGAAGAGAATCAACTTTATGAAGACACGGATCCAGAAGCCGTAGCTTTCCAATGCAAGATCATGGCCAAATCAGGATTCAGTGAGCTAACATCCATTTCTCCATCTCTTGCACAGATACCCAAAATCAAGGCTCTCTCCTTTGCCCTTGAGGAGGCTGAGACAATCATGTGTTCAGTGATCAAAAACCTGTTCGAGCAAAACAAGATCAATCCTAAAACCATTGACATACTCATCACTAATAGTAGTGTCTTCTGCCCCACCCCATCACTTAGTGCCATGGTGGTTAACAAGTTCAGAATGAGGAGCAACATCATGAGTTTCAACCTATCTGGTATGGGATGCAGTGCTGGAATTATTTCAACGAGTCTAGCTAAAGACTTGTTGAGAGTTCATAGGAACTCACTAGCTCTAATAGTAAGCACAGAGACGCTGAGTCTGAATTGGTACACTGGTAAAGTCCCTTCTATGCTGCTATCTAATTGCCTATTCAGAATGGGTGGGGCAGCTATATTGATGTCTAGTAGAGTCCAAGATAGGCACAAGGCAAAGTATAAACTACAACATATTGTTAGAACAATCACTGCACAGGATGATCAATCTCATGGCTGTGTTTACCAACGAGTGGATTCAGAGGACAAAGAAGGTGTATCCATATCAAAGAGCATAGTCAATGTGTCTGGAGATGCACTGAAGAAAAATATAGCTTCACTAGGACCATTGGTTCTGCCTTTGAGGGAGCAATTCTTGTACTTATTTTCCATTATTTGTCGCAAAATGTGGAGTACAAGAAGAATAGGTATCTATACTCCAAATTTCAACCATGCTTTTGAGCATTTCTGCATACATTCAGGGGGAAGAGCCATCATTCAAGCCGTTGAAAGAAACTTAAGGCTAAGGAAACAGGACGTGGAGCCATCAACCATGACTCTCTACAGGTTTGGAAATATCTCGTCATCTTCGATTTGGTATGAGCTGAGCTACATAGAAGCAAAAGGTAGGATGAAATGTGGGGATAGGGTGTGGCAAATTGCCTTTGGAAGTGGATTCAAATGTAACAGTGCAGTGTGGAAATGTGTACGTGACATGAAGCCAGACACCACAACTGCATGGAGGGATACAATTAACTCCTACCCCGTGGATATTATGAGAACAAGCTGA 1164 0.4201 MFEENQLYEDTDPEAVAFQCKIMAKSGFSELTSISPSLAQIPKIKALSFALEEAETIMCSVIKNLFEQNKINPKTIDILITNSSVFCPTPSLSAMVVNKFRMRSNIMSFNLSGMGCSAGIISTSLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLSNCLFRMGGAAILMSSRVQDRHKAKYKLQHIVRTITAQDDQSHGCVYQRVDSEDKEGVSISKSIVNVSGDALKKNIASLGPLVLPLREQFLYLFSIICRKMWSTRRIGIYTPNFNHAFEHFCIHSGGRAIIQAVERNLRLRKQDVEPSTMTLYRFGNISSSSIWYELSYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCVRDMKPDTTTAWRDTINSYPVDIMRTS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00112 387 Gene3D - 8 360 IPR016039 GO:0016746
Lapu9g00112 387 SUPERFAMILY Thiolase-like 50 361 IPR016039 GO:0016746
Lapu9g00112 387 CDD CHS_like 17 358 - -
Lapu9g00112 387 PANTHER 3-KETOACYL-COA SYNTHASE 3 382 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lapu9g00112 387 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 278 359 IPR013747 -
Lapu9g00112 387 Pfam FAE1/Type III polyketide synthase-like protein 5 261 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00112 Lapu-Chr9 1039222 1040659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00112 12 381 Acyl Lipid Metabolism Gene Families AT1G71160 55.946 1.38e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00112 K15397 - gmx:100783404 717.227