Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00096 ATGATGGTAAATGACCGGATTCATAACATATCCAAGCTCCAGTCTTCTTTAGCAAAGGCAGAAGGAATACTTTCTAATCTCCTACCCAATACACCATATTCTGACTTTGAATATGAACTACAAGGATTGGGATTTGAGAGAGGTTGGGGTGATACAGCAGAGAGGGTGTTAGAAATGGTGCATCTTCTACTAGACATCCTTCAAGCTCCTGATCCAAACACCTTAGAGTCATTTCTGGGAAGAATTCCTATGGTGTTCAATGTTGTAATTATATCACCACCTGGTTACTTTGGCCAAGTAAATATCCTGGGTTTGCCTGATACTGGTGGACAGATTGTTTATATACTTGATCAAGTGCGTGCTTTAGAGAAGGAGATGCTGGTCAGAATTCAAAGACAAGGACTTGATGTGTCTCCAAAAATTTTGATAGTTACTAGATTGATACCAGAGGCAAAAGGGACAACATGCAATCAGAGAGTGGAAAGAGTTAGTGGAACTGAGCATTCGTATATACTGAGAGTACCTTTTAGAACTAAGAATGGAATTTTGAGAAAATGGATTTCAAAGTTTGACATGTGGCCTTATCTTGAGACATTTGCAGAGGATGCATCACACGAAATTGCGGCTGAATTACAAGGAATTCCAGATCTGATAATTGGCAACTACAGTCATGGAAATCTTGTTGCAACCTTGTTATCTTATAAGCTAGGAATCACACAGTGCAATATAGCCCATTCATTGGAGAAGACTAAGCATCCAGGTTCTGATATATATTGGAAAAAATATGAAGACAAGTACCATTTTACTTGTCAATTCACAGCTGACCTTATTGCAATGAACAGTGCGGATTTTATAATCACTAGTACATACCAAGAAATTGCAGGAAGCAAGAATAATGTTGGACAATACGAGAGCCACAGTGCCTTCACTCTTCCAGGACTCTATCGTGTTGTTCATGGCATTGATGTTTTTGATCCCAAGTTTAATATCGTGTCTCCTGGTGCAGACATGCGCATATATTTTCCATTCTCAGACAGAGAAAAGAGGCTAACTTCTCTCCATGGCTCGATTCAAAAACTTATATATGGTGACGAACAGAATGAAGAACATGTTGGCTTGATAATTGATAGAGCAAAGCCAATTATCTTTTCTATGGCAAAACTTGATCAAGTGAAAAATATGACCGGACTTGTTGAATGCTTTGGTAAAAGCTCCAAGTTGAGAGAGCTTGTGAATCTTGTGGTAGTTGGGGGCAACATTGATGTACAAAAGTCTAGGGACACAGAAGAAATGGGGGAGATAGAGAAAATGCATAGCCTCATAGAAAAATATAACTTACACGGCCAATTTCGTTGGATAAAGGCCCAAGTGAACCGCGCTCGTAATGGAGAGCTCTACCGTTGTATTGCTGATGTGAAAGGTGCTTTTGTGCAGCCTGCTTTTTATGAAGGGTTTGGCCTAACAGTTGTGGAAGCAATGACTTGTGGTCTTCCTACATTTGCCACTTGTCATGGTGGCCCTGCTGAGATAATTGAGCATGGCGTTTCTGGATTCCATATTGAGCCACATCATCCGGATCAAGTTGCTGCAGATTTAATAAACTTTTTTGAGCAATGCCAGCATGATCCTGGCTACTGGAACAAGATTTCTGATGCAGCTCTCAGCCGCATTCTTGAGAGGTATACATGGAAGATATACTCTGAGAGGCTTCTCACTTTAGCAGGTGTCTATGGCTTCTGGAAGCACGTGTCTAAGCTTGAGAGGAGAGAAACCAGGCGATACTTGGAGATGTTCTACATGCTCAAGTTCCGAGATTTGCCCTCTTGGCCAATAATAGAATAG 1842 0.4077 MMVNDRIHNISKLQSSLAKAEGILSNLLPNTPYSDFEYELQGLGFERGWGDTAERVLEMVHLLLDILQAPDPNTLESFLGRIPMVFNVVIISPPGYFGQVNILGLPDTGGQIVYILDQVRALEKEMLVRIQRQGLDVSPKILIVTRLIPEAKGTTCNQRVERVSGTEHSYILRVPFRTKNGILRKWISKFDMWPYLETFAEDASHEIAAELQGIPDLIIGNYSHGNLVATLLSYKLGITQCNIAHSLEKTKHPGSDIYWKKYEDKYHFTCQFTADLIAMNSADFIITSTYQEIAGSKNNVGQYESHSAFTLPGLYRVVHGIDVFDPKFNIVSPGADMRIYFPFSDREKRLTSLHGSIQKLIYGDEQNEEHVGLIIDRAKPIIFSMAKLDQVKNMTGLVECFGKSSKLRELVNLVVVGGNIDVQKSRDTEEMGEIEKMHSLIEKYNLHGQFRWIKAQVNRARNGELYRCIADVKGAFVQPAFYEGFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIEPHHPDQVAADLINFFEQCQHDPGYWNKISDAALSRILERYTWKIYSERLLTLAGVYGFWKHVSKLERRETRRYLEMFYMLKFRDLPSWPIIE* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00096 613 Gene3D - 1 84 - -
Lapu9g00096 613 Pfam Sucrose synthase 1 362 IPR000368 GO:0005985|GO:0016157
Lapu9g00096 613 NCBIfam sucrose synthase 1 606 IPR012820 GO:0005985|GO:0016157
Lapu9g00096 613 Gene3D Glycogen Phosphorylase B; 89 606 - -
Lapu9g00096 613 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 104 573 - -
Lapu9g00096 613 PANTHER - 1 606 IPR012820 GO:0005985|GO:0016157
Lapu9g00096 613 FunFam Sucrose synthase 336 563 - -
Lapu9g00096 613 Pfam Glycosyl transferases group 1 367 546 IPR001296 GO:0016757
Lapu9g00096 613 Gene3D Glycogen Phosphorylase B; 336 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00096 Lapu-Chr9 897715 904129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00096 1 606 Glycosyltransferase AT5G49190 79.208 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00096 K00695 - gmx:100788717 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00096 9 897715 904129 Lapu9g00096 9 897715 904129 ECH