Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00070 ATGAGTGCAACATGGGTTTTTGTGCTGAGTGTTGCAGCTATGTTGGTGGTTGGGAACGGACAATCATCAGTGAAGCCATTGGTGAAGACAGTGAAGGGGAAGAAGGTGTGTGACAAAGGGTGGGAGTGCAAGGGTTGGTCTGCTTATTGCTGCAACGAAACTATCTCTGACTACTTCCAGACCTACCAGTTTGAGAACCTCTTTGCAAAGCGCAATTCGCCAGTGGCACATGCTGTTGGATTCTGGGACTACCGTTCTTTTATCACTGCTGCAGCACAGTATCAGCCTCTTGGCTTTGGCACCACTGGGGGAACGACCAGTGGCCAGAAGGAGGTTGCAGCTTTCCTTGGCCATGTTGGCAGCAAAACCTCTTGTGGTTATGGGGTGGCTACTGGGGGACCCTTAGCCTGGGGCTTATGCTACAACAAGGAATTGAGTCCTGATAAATTCTACTGCGACGAATACTACAAATTAACCTACCCTTGCACTCCTGGTGCAGCATACTATGGCCGTGGTGCCATCCCACTTTACTGGAACTACAACTATGGAAAAGCTGGGGAAGCCTTGAAGGTGGATCTGTTGAACCATCCAGAATACATAGAACAGAATGCAACCCTAGCCTTCCAGGCAGCAATGTGGCAGTGGATGACCCCACCTGAGAAGCACCTACCTTCACCCCATGATGTCTTTGTTGGGAATTGGAAACCCACCAAGAATGACACCTTGTCCAAAAGGGTACCTGGATTTGGTGCCACAATAAATTTGCTCTATGGGGACCAAACTTGTGGCCAGGGATCTGATAATGAGGCCATGAACAACATCATTTCTCACTATCTTTATTACCTTGATCTCATGGGAATTGGCAGAGAAGAGGCAGGGCCTAATGAAGTTCTCTCCTGTGCTGAACAAAAGGCTTTTAAGCCCTCTGGCCCACCATCTTCTTCCTCAAATTGA 954 0.4864 MSATWVFVLSVAAMLVVGNGQSSVKPLVKTVKGKKVCDKGWECKGWSAYCCNETISDYFQTYQFENLFAKRNSPVAHAVGFWDYRSFITAAAQYQPLGFGTTGGTTSGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKFYCDEYYKLTYPCTPGAAYYGRGAIPLYWNYNYGKAGEALKVDLLNHPEYIEQNATLAFQAAMWQWMTPPEKHLPSPHDVFVGNWKPTKNDTLSKRVPGFGATINLLYGDQTCGQGSDNEAMNNIISHYLYYLDLMGIGREEAGPNEVLSCAEQKAFKPSGPPSSSSN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00070 317 Gene3D - 63 306 - -
Lapu9g00070 317 FunFam Endochitinase (Chitinase) 142 202 - -
Lapu9g00070 317 SUPERFAMILY Lysozyme-like 55 306 IPR023346 -
Lapu9g00070 317 PANTHER CHITINASE-RELATED 8 304 - -
Lapu9g00070 317 Gene3D Endochitinase, domain 2 143 202 - -
Lapu9g00070 317 Pfam Chitinase class I 63 290 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu9g00070 317 PIRSF Endochitinase 1 307 IPR016283 GO:0004568|GO:0005975
Lapu9g00070 317 CDD chitinase_GH19 63 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00070 Lapu-Chr9 621809 623935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00070 22 306 Glycoside Hydrolase AT3G16920 81.404 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00070 - - vra:106760177 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00070 9 621809 623935 Lapu9g00070 9 621809 623935 ECH