Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00063 ATGAGAGTTTTGGAGAGTGCTTCTCTGGTTGAATTTGTCACTCATCTGAATATGGCTTTGCAGAAGTATGCTCCTTCTGGCCATGCACCTTCCATTAATATGAAACATTTGACCTTTTCCAGTAAGATGCCTAAGAAAGCTGAGCATGACAAGGCAAATCACAATCATAACATGGATGTGGATATTGACCTTAGGGAAGTTTATTTTCTCATTATGCACTTTCTTTCAGCTGGGCCATGTCATAAAACTTATTTACAATTTTGGAATGAGCTTCTTGAGCATCAACTTTTGCCTAGAAGGTATCATGCGTGGTATTCAAAGACTGGAGCATGTAGTGGAGACAAAGATGATGATGGTCTATCATTCCCTTTAAATTACAATATGTTACTGGAGAGGTATCCTCATATTGAAAAGGATCACCTGGTAAAGCTTTTAAAGCAGTTGTTATTAAATACAGCCACCCCATCACTGAGTATGAATCTTGGAAATGCTCCAAATGCAGCTGATGTACCCACACTTTTAGGAAGTGGTTCATTTTCACTGCTGAGCTATGATAGGGATAAAATGAAAGGAGTCAAACAGCCACCTCCTCACATGCGCTGGCCTCATATGAAAGCTAATCAGGTTCATGGGCTTAATTTGAGGGAAATTGGGGGTGGTTTCCCAAGACATCACCGTGCACCATCTATACGTTCTGCATGCTATGCCATTGCAAAACCTTCTACCATGGTGCAAAAGATGCAAAATATCAAAAGGTTAAGAGGGCACCGCAATGCTGTTTATTGTGCTATATTTGATCGGTCAGGAAGGTATGTGATTACTGGTTCAGATGATCGACTTGTAAAGGTTTGGTCAATGGAAACTGCATATTGTTTGGCCAGTTGCCGTGGACATGATGGTGACATCACTGACTTGGCTGTGAGTTCAAATAATGCTTTAGTTGCATCGTCATCAAATGACTGTGTCATTCGAGTTTGGCGCTTGCCAGATGGCTTGCCAATATCAGTTTTGCGGGGACATACTGGAGCTGTTACAGCCATAGCATTTAGTCCCAGACCAAATGCTGTATACCAGCTTTTATCTTCCTCTGATGATGGAACTTGTAGGATATGGGATGCAAGGTATACCCATTCAAGTCCAAGATTATATATTCCAAGGCCTTCGGATTCTGTAATTGGGAAGAGCAGTGGCCCATCTTCAAGTACTTTACCGCAGAGCCATCAGATTTTTTGCTGTGCATTTAATGCTAATGGAACTGTCTTTGTAACTGGTAGCTCTGACAATCTTGCTAGGGTGTGGAATGCATGTAAACTCAGCATGGATGACACTGATCAACCAAATCATGAGATAGATGTGCTATCTGGGCATGAGAATGATGTGAATTATGTGCAATTCAGTGGATGTGCAGTAGCTTCTCGGTTTTCCCCAACAGAAACTTGGAAGGAGGAAAATATTCCCAAATTCAAAAATTCCTGGTTGAATCATGACAATATAGTTACCTGCTCCCGTGATGGGAGTGCTATAATATGGATTCCTAGATCTCGTAGATCACATGGGAAAAGCGGTCGCTGGACACGTGCTTATCATCTGAGAGTTCCACCTCCGCCTGTGCCTCCTCAACCTCAGAGAGGTGGTCCTCGTCAAAGAATTCTACCAACTCCACGTGGTGTAAATATGATTGTTTGGAGCCTTGACAATCGCTTCGTTCTTGCAGCCATTATGGATTGCAGAATTTGTGTTTGGAATGCATCTGACGGCAGCTTAGTACACTCATTAACTGGGCATACTGAATCTACATATGTTCTGGATGTTCATCCCTTCAATCCCCGGATAGCCATGAGTGCTGGTTACGATGGAAGAACTATTGTTTGGGATATATGGGAAGGCATGCCTATCAGGATATATGAGATATCACGCTTCAAGTTGGTGGATGGAAAATTTTCTCCAGATGGGACATCAATTATACTTTCGGATGATGTTGGTCAACTATATATATTAAGCACAGGTCAAGGTGAGTCCCAGAAAGATGCTAAATATGATCAGTTCTTTCTCGGTGATTATCGACCTCTGATTCAAGACACCCATGGTAATGTACTAGACCAGGAAACTCAAATTGTTCCATATCGACGGAATCTGCAAGATTTGCTTTGTGATTCAGCTATGATACCATACTCAGAACCTTACCAGAGTGAATTTCAGCAAAGACGATTAGGAGCATTAGGCCTTGAGTGGCGTCCATCATCGCTAAGGCTTGCTGTTGGTCCTGATTTCAGTCTGGACCCTGATTACCATATGCTTCCATTGGCAGACTTGGATTTGGTAACAGAACCACTGCCGGAGTTTATAGATGCTATGGAATGGGAACCTGAAGTTGAAGTGTTTAGTGATGATGCAGATTCAGAGTATAACGTCACTGAAGATTGCTCTTCTAAGGGTGAGAAAGGATGTTCCAGCTCCAATGCTTCTGGTGATTCAGGGTGCAGCACAGACGACAGTGAAGGGGAAGACACTCGCATGGAAAGCATTCGTAGATCAAAGAGGAAAAAGCAGAAGACTGAGACTGAGATTATGACTTCTTCTGGGAGACGTGTGAAAAGGAGGAACTTGGATGAGTGTGATGGCAATACCATTGGAAGTAGCCGAAGTAGGAAGGGAAAAAATGGCCAAAAAATATCAAGAAGGAAATTTTCTAAATCTAAATCTTCCCGACCTCAAAGGGCTGCTGCACGCAATGCTCTACATCTATTTTCCAAAATTACTGGTACACCGACAGATGGAGATGAAGACAGTCTGGTTGGTGATTTTTCAGATAGTGAATCAACATTGCAAGAGTCTAATATTGACAGTGATGAATCTGGTGGGACTTTACATAATGATCAATTGATTTATTCTAAGGGAAAAGAAGTATCATACTATGAATCGGAGGACACAAAATCTCATGAGTTAACTGAAACTTGTGTGAATTCAATGAACAAGAGGAGATTGGTTCTGAAGTTGCCAATTCGTGATATATCCAAGTCCATAAATGAGTTTGATTACCAGGCTGAGTTGGCTGGCTCATCATCGAAAACTATACAAGAAGTTACTGATTTTAATGGGAACAGACCAAGTTTTAAGGATTCAGCATATTATTCTGGCAGTACAAGTTACCCTACAGTTGAAAGAACAGATCAAGCAAAACCTGGCCAGGTGAAAGATCATGTAGACTTGCTGGGGAAAATTAAATGGGGAATGGTTAGGGCACGGTCATCTAAACCGTTGAGAGCGGGAGAAGCTATGCCATCAGAGGCAAATCCTTACTCTGGAAAATGTTCCAATCATCTTGATGAAAAAGAGAATGTTAGTAGTGGGCATGAGAAAGAGGAGAAGAACTTTAGTGCACCAACTCCTGATTTTGAAATCCAAAAGGATGACTATCTAGTAGATAGCTTGACAGAGATTAATGAAAATTGTGCTGGTACTATCACCTTGACAGAGATCACAGGTTCCAGCAATTGCAGGGACAAAGATGAATCACTAATTCCTGCATACGTGATTCCTCAGGATACTGTTACTGCTTCAATTAGCTATAGTGGGGTTGACCAACTACCTGAACCAAATCTTGGTTTTTGTTCTGTTTCAACAAAACTAAGGTCGAAAAGGAGTGCAAGGGATCCTGAAAGTCCATCCAAGCATGAAACAAAATCTTCTGTGCTGAAGAATAATGCGTGTAGCTCTAATGATAATAATACTTCAAACAATGAACAGCGTGCGGTTGTGGATGACAATGACACTAGAGTAAAGTCTAATCAGGGAGAGAATGGATCACAAAAACTAGATCCTCAGATAAGAGAAAATAGGACTTCTCAGGATTTGCTAGAACCACAATCACAAAGAGATAAAATGTATAAAGCTGTTTATAGAAGATCACGATCACATAGGGCTGTGACTAATTTAGCTGACAGTGGTGGCCAGGGTGAATCTACTTCAAATGGGAGCAACAGTAATTTCAACACCACTGCAGACTTAAGTAATGGCACAAATGAGGCTATTCATACCAATGGATCCTTAGAGTTGGAACCAATTACTTGTGACCCAAACTATGAGCAGAATAATTGCAACGTGCTGCAAGGACATGGAGATTGTATGATTAAAAGTCCACAGAATGTTTCCACAAGTGGAGGACAAGTCACAGAAGAAGAAAGGGCTTCTAATTCGAAACTGACTGTTGGTTTGAGGTCCACTAGGAGTCGGAGGTCTAGTTATAATATTCGTGAGACTAGTCCTGTAAATAAAAGGAAATCACTACAATCGGCTGTGAAAGTATCGTGGTTGTTGTTATCAACCCATGAGGAAGGATGCAGATATATTCCACAACAGGGAGATGAAGTTGTATATTTGAGACAGGGGCATCAGGAGTATATAGATTATTCTCGCAAAAGTGAGTCAGGCCCTTGGGTATCACTTAAGGGACATATAAGAGCTGTAGAGTATTGTAGAGTTCGAAGCCTTGAGTATTCCCATCTTGCAGGGTCTGGTGATAGTTGCTGCAAAATGACTCTTCAGTTTGTAGATCCTAATTCAAGTGTTGTTGGAAAATCTTTTAAGTTAACCCTACCTGAAGTGACTAGTTTCCCAGATTTTCTTGTTGAAAGGACTAGGTTTGATGCTGCTATGCAAAGAAATTGGACACGCAGGGATAAATGCAGGGTTTGGTGGAGAAATGAGGATAATTCCTCTGGTAATTGGTGGGATGGTCGAATTTTGTGCGTGAAAGCCAAGTCTTCTGAATTTTCAGACAGTCCATGGGAGAGTTGTACTGTGCGCTACAAGAATGACCTCACTGAAACGCATTTGCATAGTCCTTGGGAGCTTTTTGATGCTGACACTGTATGGGAACAGCCTCACATTGATGATAACATGAGAAATAAACTGCAATCTGCTCTCAACAAATTACTGCAGTCAGGCAACACGGTCCAGGATCGTTATGGAGTGCATGAATTGAAGAAAATTTCAAACAAGTCCAAATTTATAAACAGGTATCCTGTTCCTATATCACTCGAATTGGTGCAGTCAAGGTTGAATAACAATTACTACCGTAGTTTGGAGGCTCTGCAGCACGATGTGACAAATTTACTGGCCAACTCCACTTCCTTTTTTGAAAAGGATGCAGAGATGTCAGCAAAAATCAAACGCTTATCAGAATGGTTCACACGAACATTATCATCTCTATAG 5214 0.4133 MRVLESASLVEFVTHLNMALQKYAPSGHAPSINMKHLTFSSKMPKKAEHDKANHNHNMDVDIDLREVYFLIMHFLSAGPCHKTYLQFWNELLEHQLLPRRYHAWYSKTGACSGDKDDDGLSFPLNYNMLLERYPHIEKDHLVKLLKQLLLNTATPSLSMNLGNAPNAADVPTLLGSGSFSLLSYDRDKMKGVKQPPPHMRWPHMKANQVHGLNLREIGGGFPRHHRAPSIRSACYAIAKPSTMVQKMQNIKRLRGHRNAVYCAIFDRSGRYVITGSDDRLVKVWSMETAYCLASCRGHDGDITDLAVSSNNALVASSSNDCVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSSPRLYIPRPSDSVIGKSSGPSSSTLPQSHQIFCCAFNANGTVFVTGSSDNLARVWNACKLSMDDTDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSPTETWKEENIPKFKNSWLNHDNIVTCSRDGSAIIWIPRSRRSHGKSGRWTRAYHLRVPPPPVPPQPQRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGMPIRIYEISRFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQIVPYRRNLQDLLCDSAMIPYSEPYQSEFQQRRLGALGLEWRPSSLRLAVGPDFSLDPDYHMLPLADLDLVTEPLPEFIDAMEWEPEVEVFSDDADSEYNVTEDCSSKGEKGCSSSNASGDSGCSTDDSEGEDTRMESIRRSKRKKQKTETEIMTSSGRRVKRRNLDECDGNTIGSSRSRKGKNGQKISRRKFSKSKSSRPQRAAARNALHLFSKITGTPTDGDEDSLVGDFSDSESTLQESNIDSDESGGTLHNDQLIYSKGKEVSYYESEDTKSHELTETCVNSMNKRRLVLKLPIRDISKSINEFDYQAELAGSSSKTIQEVTDFNGNRPSFKDSAYYSGSTSYPTVERTDQAKPGQVKDHVDLLGKIKWGMVRARSSKPLRAGEAMPSEANPYSGKCSNHLDEKENVSSGHEKEEKNFSAPTPDFEIQKDDYLVDSLTEINENCAGTITLTEITGSSNCRDKDESLIPAYVIPQDTVTASISYSGVDQLPEPNLGFCSVSTKLRSKRSARDPESPSKHETKSSVLKNNACSSNDNNTSNNEQRAVVDDNDTRVKSNQGENGSQKLDPQIRENRTSQDLLEPQSQRDKMYKAVYRRSRSHRAVTNLADSGGQGESTSNGSNSNFNTTADLSNGTNEAIHTNGSLELEPITCDPNYEQNNCNVLQGHGDCMIKSPQNVSTSGGQVTEEERASNSKLTVGLRSTRSRRSSYNIRETSPVNKRKSLQSAVKVSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIDYSRKSESGPWVSLKGHIRAVEYCRVRSLEYSHLAGSGDSCCKMTLQFVDPNSSVVGKSFKLTLPEVTSFPDFLVERTRFDAAMQRNWTRRDKCRVWWRNEDNSSGNWWDGRILCVKAKSSEFSDSPWESCTVRYKNDLTETHLHSPWELFDADTVWEQPHIDDNMRNKLQSALNKLLQSGNTVQDRYGVHELKKISNKSKFINRYPVPISLELVQSRLNNNYYRSLEALQHDVTNLLANSTSFFEKDAEMSAKIKRLSEWFTRTLSSL* 1738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 1211 1227 - -
Lapu9g00063 1737 FunFam WD40/YVTN repeat-like-containing domain 1631 1737 - -
Lapu9g00063 1737 SMART WD40_4 585 625 IPR001680 GO:0005515
Lapu9g00063 1737 SMART WD40_4 544 582 IPR001680 GO:0005515
Lapu9g00063 1737 SMART WD40_4 330 372 IPR001680 GO:0005515
Lapu9g00063 1737 SMART WD40_4 446 511 IPR001680 GO:0005515
Lapu9g00063 1737 SMART WD40_4 396 434 IPR001680 GO:0005515
Lapu9g00063 1737 SMART WD40_4 246 285 IPR001680 GO:0005515
Lapu9g00063 1737 SMART WD40_4 288 327 IPR001680 GO:0005515
Lapu9g00063 1737 Pfam WD domain, G-beta repeat 586 625 IPR001680 GO:0005515
Lapu9g00063 1737 Pfam WD domain, G-beta repeat 248 285 IPR001680 GO:0005515
Lapu9g00063 1737 Pfam WD domain, G-beta repeat 333 372 IPR001680 GO:0005515
Lapu9g00063 1737 Pfam WD domain, G-beta repeat 406 434 IPR001680 GO:0005515
Lapu9g00063 1737 Pfam WD domain, G-beta repeat 291 326 IPR001680 GO:0005515
Lapu9g00063 1737 Pfam WD domain, G-beta repeat 451 510 IPR001680 GO:0005515
Lapu9g00063 1737 ProSiteProfiles Trp-Asp (WD) repeats profile. 337 372 IPR001680 GO:0005515
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 1309 1336 - -
Lapu9g00063 1737 ProSiteProfiles Trp-Asp (WD) repeats profile. 592 626 IPR001680 GO:0005515
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 531 545 - -
Lapu9g00063 1737 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 337 372 - -
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 1210 1336 - -
Lapu9g00063 1737 ProSitePatterns Trp-Asp (WD) repeats signature. 612 626 IPR019775 -
Lapu9g00063 1737 ProSiteProfiles Trp-Asp (WD) repeats profile. 402 434 IPR001680 GO:0005515
Lapu9g00063 1737 FunFam PH-interacting protein isoform X1 228 397 - -
Lapu9g00063 1737 PANTHER WD REPEAT DOMAIN 9 1217 1736 - -
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 810 828 - -
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 886 901 - -
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 935 958 - -
Lapu9g00063 1737 CDD WD40 249 625 - -
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 1262 1289 - -
Lapu9g00063 1737 Gene3D - 404 538 IPR015943 GO:0005515
Lapu9g00063 1737 FunFam WD40 domain-containing protein 398 478 - -
Lapu9g00063 1737 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 295 328 - -
Lapu9g00063 1737 Gene3D - 1629 1737 IPR036427 GO:0005515
Lapu9g00063 1737 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 253 288 - -
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 528 549 - -
Lapu9g00063 1737 ProSiteProfiles Trp-Asp (WD) repeats profile. 253 294 IPR001680 GO:0005515
Lapu9g00063 1737 SUPERFAMILY WD40 repeat-like 244 668 IPR036322 GO:0005515
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 1105 1127 - -
Lapu9g00063 1737 CDD Bromo_WDR9_I_like 1609 1737 - -
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 794 958 - -
Lapu9g00063 1737 Gene3D - 547 681 IPR015943 GO:0005515
Lapu9g00063 1737 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 336 IPR001680 GO:0005515
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 1085 1131 - -
Lapu9g00063 1737 Gene3D - 226 403 IPR015943 GO:0005515
Lapu9g00063 1737 Pfam Bromodomain 1675 1722 IPR001487 GO:0005515
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 831 872 - -
Lapu9g00063 1737 SUPERFAMILY Bromodomain 1661 1735 IPR036427 GO:0005515
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 1228 1251 - -
Lapu9g00063 1737 MobiDBLite consensus disorder prediction 1381 1422 - -
Lapu9g00063 1737 FunFam PH-interacting protein isoform X1 485 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00063 Lapu-Chr9 488915 513097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00063 245 434 Miscellaneous Gene Families AT5G08390 22.513 7.09e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00063 K11797 - gmx:100818665 3078.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00063 9 488915 513097 Lapu9g00063 9 488915 513097 ECH