Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00842 ATGAAGGTATCATTTGCTGCTATGCTTCTTCTGTGCCTTGTCCTCAGCTCCTCCTTGTTCGAACTGTCATCTGCCGGTGGTTTCTGCAGCTCCAAGTGCGCGCAGAGGTGCTCTAAGGCTGGGATGAAGGACAGGTGCATGAAGTTCTGCGGAATCTGCTGCAGCAAGTGCAAGTGTGTGCCATCTGGGACTTATGGCAACAAGCACGAGTGCCCTTGTTACAGGGACCTCAAGAACTCCAAGGGCAAGGGAAAGTGCCCTTAA 264 0.5265 MKVSFAAMLLLCLVLSSSLFELSSAGGFCSSKCAQRCSKAGMKDRCMKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00842 87 Pfam Gibberellin regulated protein 28 87 IPR003854 -
Lapu8g00842 87 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00842 Lapu-Chr8 26578202 26579479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00842 - - gmx:100305602 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00842 8 26578202 26579479 Lapu7g02293 7 39224264 39224638 ECH
Lapu8g00842 8 26578202 26579479 Lapu8g00842 8 26578202 26579479 ECH
Lapu8g00842 8 26578202 26579479 Lapu9g02107 9 35827744 35828871 PCT