Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00787 ATGGCTTCTTCTTCTCCTCCCTCTCCCTCTTTCCTCACACACCTTCCTCTTCATCCTCCTTCTTCCTCTCACCAAGGTGAGAAGCGCGTGGAGGACGATGAATCGCGCGTTCCGATTCACATCGTGACGGAGGCGTCACAACTTCCCGTCGACTTTCTGGAACCCTCGCCTCAATCGAAGCTCGTCATTGGCTTTGACTGCGAGGGTGTTGACTTGTGTCGCAAAGGCGCTCTTTGCATAATGCAGCTTGCGTTTCCTGATGCTGTGTACTTGGTTGATGCGATTGAAGGAGGAGCAGAGCTTATCGAAGCGTGTAAGCTTGCACTTGAATCTAATTACATCACAAAAGTGATTCATGATTGCAAACGGGATAGTGAGGCACTCTTCTTTCAGTTCGGCATCAAGTTGAACAATGTGGTGGATACTCAGATTGCTTATTCACTTATAGAGGATCAAGAAGGACGAAAGAGATCGCGCGATGACTACATTTCATTTGTTGGCCTCCTTGCAGATCCACGTTATTGTGGCATATCATATGTTGAGAAGGAAGAAGTTCGTGACCTCCTTCGACAGGACCCTGAGTTTTGGACACACAGACCATTGTCTGAACTAATGATCCGTGCTGCTGCTGACGATGTTCGTTTTCTTCTCTACATTTATCACCAAATGATGGAGAAATTAAATGAGCGGTCTTTATGGTATCTTGCAGTTCGTGGTGCCTTGTATTGCCGATGTTTCTGTGTGAACAGTAACGATTTTGCTGATTGGCCATCTCTACCTCAGATTCCAGATATCCTGAATGCTGATGGTGATGGTCCCGAGGAGGAAATTCTTTCAGTTCTTGATGTTCCCCCTGGAAAGATGGGACGTGTTATTGGGAAAAGAGGGGCGACAATTTTGTCAATTAAGGCTTCATGCAATGCGGAAATTCACACCGGAGGTCCCAAGGGCCCACCTGACAAGGTGTTTATCATCGGACCAGTGAAGGAAGTGAGGAAAGCCGAGGCCATGTTTCGGGGTAGAATGTTGGATGTGTAG 1038 0.4721 MASSSPPSPSFLTHLPLHPPSSSHQGEKRVEDDESRVPIHIVTEASQLPVDFLEPSPQSKLVIGFDCEGVDLCRKGALCIMQLAFPDAVYLVDAIEGGAELIEACKLALESNYITKVIHDCKRDSEALFFQFGIKLNNVVDTQIAYSLIEDQEGRKRSRDDYISFVGLLADPRYCGISYVEKEEVRDLLRQDPEFWTHRPLSELMIRAAADDVRFLLYIYHQMMEKLNERSLWYLAVRGALYCRCFCVNSNDFADWPSLPQIPDILNADGDGPEEEILSVLDVPPGKMGRVIGKRGATILSIKASCNAEIHTGGPKGPPDKVFIIGPVKEVRKAEAMFRGRMLDV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00787 345 Pfam KH domain 281 338 IPR004088 GO:0003723
Lapu8g00787 345 SMART 35exoneu6 39 228 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lapu8g00787 345 ProSiteProfiles Type-1 KH domain profile. 276 338 - -
Lapu8g00787 345 MobiDBLite consensus disorder prediction 1 20 - -
Lapu8g00787 345 CDD KH-I 280 337 - -
Lapu8g00787 345 CDD Egl_like_exo 51 247 - -
Lapu8g00787 345 MobiDBLite consensus disorder prediction 1 34 - -
Lapu8g00787 345 Pfam 3'-5' exonuclease 51 227 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lapu8g00787 345 SUPERFAMILY Ribonuclease H-like 28 250 IPR012337 -
Lapu8g00787 345 SMART kh_6 275 343 IPR004087 GO:0003676
Lapu8g00787 345 Gene3D K Homology domain, type 1 267 342 IPR036612 GO:0003723
Lapu8g00787 345 Gene3D - 4 243 IPR036397 GO:0003676
Lapu8g00787 345 PANTHER EGALITARIAN, ISOFORM B 32 343 - -
Lapu8g00787 345 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 268 342 IPR036612 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00787 K18740 - gmx:100810098 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00787 8 25917669 25924871 Lapu8g00787 8 25917669 25924871 ECH