Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00771 ATGTCGTCTTCTTCCGCGAACGACGCCGAGGCTCTCCGCCGCAACCGCATCCTCTCCAGCAAGCTCTACTTCGACGTGTCTCCGTCCAAGGTTCCGCTAATCTACTCCGAGTCCTACGACATAGCGTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCGAAGTGGGGACGCATTTGCCGATTCCTCGTTTCGTTTGGTATTCTCGACAAAAAATGCATCGTTGAGCCTCTGGAAGCTTCCAAGGATGATCTTCTAGTGGTTCACTCGCAATTGTATCTGAATAGCCTGAAGGAGAGTTCAAAAGTTGCTATGATAGTCGAGGTCCCTCCCGTGGCATTAATTCCCAACTGTCTTGTGCAACAAAAAGTTCTTTTCCCATTCAGGAAGCAGGTTGGAGGAACTGTATTGGCTGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGCTCTGCAGAAAAAGGAGGTGGATTCTGTGCTTATGCAGATATTTCTCTTTGTATCCACTTTGCTTTTGTTCAGTTGAATATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAACGGTCATGAAATGGACTTTGCCTATGATAGCCGAGTCTATATCTTGGATATGTACAATCCTGGAATATATCCTTTGGATTATGAGGCGAGAAACTACATAAATCAGAAGGTTGAAGTAAAGAGTGGGACACTTACAGAAGAGTACCTGCAAAAATTAGATGAAGCACTAGAGGTTGCTGGGCGAAGATTTAACCCTGAGTTGGTAATTTATAATGCTGGAACCGACATCCTCGAAGGAGATCCATTAGGAAGGTTGGAGATCAGTCCTGAAGGAGTTGCCCTTAGAGATGAAAAAGTTTTCCGGTTTGCTCGTGAGAAGAACATTCCCATCGTCATGCTCACTTCAGGTGGTTACATGAAATCCAGTGCTAGAGTGATTGCAGATTCAATAGTCAATCTTTCCAAGAAATGCTTGATAGAAACGAGTGGAGCTCCTAAGTCTACGTGA 1047 0.447 MSSSSANDAEALRRNRILSSKLYFDVSPSKVPLIYSESYDIAFLGIEKLHPFDSSKWGRICRFLVSFGILDKKCIVEPLEASKDDLLVVHSQLYLNSLKESSKVAMIVEVPPVALIPNCLVQQKVLFPFRKQVGGTVLAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFVQLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTLTEEYLQKLDEALEVAGRRFNPELVIYNAGTDILEGDPLGRLEISPEGVALRDEKVFRFAREKNIPIVMLTSGGYMKSSARVIADSIVNLSKKCLIETSGAPKST* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00771 348 CDD HDAC_classIV 50 333 IPR044150 GO:0004407|GO:0016575
Lapu8g00771 348 SUPERFAMILY Arginase/deacetylase 28 333 IPR023696 -
Lapu8g00771 348 FunFam Histone deacetylase 11 31 340 - -
Lapu8g00771 348 PANTHER HISTONE DEACETYLASE 2-RELATED 39 333 - -
Lapu8g00771 348 Pfam Histone deacetylase domain 50 331 IPR023801 -
Lapu8g00771 348 PRINTS Histone deacetylase superfamily signature 265 275 IPR000286 -
Lapu8g00771 348 PRINTS Histone deacetylase superfamily signature 188 203 IPR000286 -
Lapu8g00771 348 PRINTS Histone deacetylase superfamily signature 154 177 IPR000286 -
Lapu8g00771 348 Gene3D Histone deacetylase domain 30 344 IPR037138 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00771 K11418 - gmx:100781276 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00771 8 25756930 25762523 Lapu8g00771 8 25756930 25762523 ECH