Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00759 ATGGACCCGCCCGCAACCTACATTTCCTCCTCCGACCTCCGCAACCACAACACGCGCCACGACGCCTGGATCTCAATCCACGGCAAAGTCTACGACGTCTCATCCTGGCTCCACCGCCACCCCGGCGGCACTCTCCCGCTTCTCACCGTCGCCGGAACCGACGCCACCGACGCCTTCCTCGCCTTCCACCCGCCCTCCGCGGCTGCTCTCCTCCCCGCATTCTCCACGGGCCTCCTCCTCTCCGACTACGCCGTCTCCGCCGCCTCCTCCGACTACCGCCAGCTCCTCTCCCAACTCTACGACCTCAACCTCTTCGAACGCAAGGGCCATTCCACCCTCATCTTGCTCTCTCTCATCTTCACTCTCCTCCCTCTCTGCATCTGCGGCATCGTCTTCTCGGACAGCACGTGCGTGCACTTGCTCTCCGGCGCCTTGATCGGCTTCCTCTGGATTCAGAGTGGCTGGATTGGCCATGACTCCGGCCACTACAACGTCATGCTCAACCGACGCCTCAACCGCGTCGCGCAGATCCTTTCCGGCAACGTTCTCGCCGGAATCAGCATTGCCTGGTGGAAGTGGAACCACAACGCGCACCACATTGCGTGCAATAGCCTCGACTTCGATCCCGATCTTCAGCACCTTCCCTTCTTCGTCGTCTCTTCTAGGTTTTTCAACTCCCTAACTTCCAAATTCTACGATAGAAAGCTCCATTTCGATTCCCTCGCCAGGTTTTTGGTGAGTTACCAGCATTGGACTTACTACCCTGTCATGTGCTTCGCTAGGGTTAACCTTTTTGCTCAGTCTTTTTTCCTTTTGTTGTCCAAAAGAAAGGTGGAGAACAGAGGAATTGAGCTTTTAGGGTTGCTTGCGTTTTGGGTATGGTACCCTTTGTTGGTTTCTTTCTTGCCAAATTGGTGGGAGAGGGTTTTGTTCGTTGTGACAAGCTTTTCTGTGACGGGTATTCAGCATGTGCAGTTTTGCTTAAACCATTTCTCTTCCAAAGTTTATCTTGGTCCTCCAAGTGGCGGTGATTGGTTTGAGAAGCAGACTAATGGAACTCTTGATGTCAGCTGTTCTGCTTGGATGGATTGGTTTCATGGTGGCCTTCAGTTTCAGGTGGAGCACCATTTGTTTCCCCGCCTCCCCCGCTGCCATCTGAGGAAGATTGCGCCCTTGGTTAAGGATCTTTGCAAGAAGCATAACCTTCCTTACAACTGTGTGTCCTTTTGGAAGGCCAATGTGCTGACGATTCAGACACTGCGAAACGCGGCGTTGCAGGCCAGGGATGGTTCTGGCCCGGCTCCCAAGAATTTGGTTTGGGAGGCTGTTAATACCCATGGATGA 1344 0.5432 MDPPATYISSSDLRNHNTRHDAWISIHGKVYDVSSWLHRHPGGTLPLLTVAGTDATDAFLAFHPPSAAALLPAFSTGLLLSDYAVSAASSDYRQLLSQLYDLNLFERKGHSTLILLSLIFTLLPLCICGIVFSDSTCVHLLSGALIGFLWIQSGWIGHDSGHYNVMLNRRLNRVAQILSGNVLAGISIAWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSRFFNSLTSKFYDRKLHFDSLARFLVSYQHWTYYPVMCFARVNLFAQSFFLLLSKRKVENRGIELLGLLAFWVWYPLLVSFLPNWWERVLFVVTSFSVTGIQHVQFCLNHFSSKVYLGPPSGGDWFEKQTNGTLDVSCSAWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRNAALQARDGSGPAPKNLVWEAVNTHG* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00759 447 PANTHER FATTY ACID DESATURASE 2 5 428 IPR012171 GO:0016491
Lapu8g00759 447 CDD Delta6-FADS-like 140 402 - -
Lapu8g00759 447 SMART Cyt_b5_2 8 80 IPR001199 -
Lapu8g00759 447 Gene3D - 5 89 IPR036400 -
Lapu8g00759 447 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 72 IPR001199 -
Lapu8g00759 447 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 80 IPR036400 -
Lapu8g00759 447 PIRSF FA_sphingolip_des 2 435 IPR012171 GO:0016491
Lapu8g00759 447 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 80 IPR001199 -
Lapu8g00759 447 Pfam Fatty acid desaturase 139 406 IPR005804 GO:0006629
Lapu8g00759 447 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Lapu8g00759 447 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Lapu8g00759 447 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00759 Lapu-Chr8 25641615 25645142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00759 7 447 Lipid Metabolism Gene Families AT2G46210 61.451 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00759 K21737 - gmx:100776476 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00759 8 25641615 25645142 Lapu8g00759 8 25641615 25645142 ECH