Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00723 ATGGATTTCAGAGTGATGGGTTTGGAGTCTCCCTTGTTCCACACGCTGCACCGCATGATGGACATGGCGGAGGAGGGTGCAGGGGACAAGACACACAATGCTCCGACACAGTCATACGTGAGAGACGCGAAAGCTATGGCTGCAACACCTGCAGATGTGAAGGAATATCCGAATTCCTACGTGTTCGAGATCGATATGCCAGGTTTGAAATCCGGTGACATAAAGGTTCAAGTTGAAGACGATAACGTGCTTCTGATTAGCGGGGAGAGAAAGAGGGAGGAAGAAAAAGAAGGGGCAAAGTTTCTGAGAATGGAAAGAAGGGTTGGGAAATTGATGCGCAAGTTTGTGTTACCTGAAAATGCAAACACTGATGCTATCTCTGCTGTGTGTCAAGATGGGGTGCTTAGTGTTACAGTGCAGAAATTGCCTCCTCCTGTACCTAAGAAGCCAAGGACTATTCACGTCAAGATTGCTTGA 477 0.4759 MDFRVMGLESPLFHTLHRMMDMAEEGAGDKTHNAPTQSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGAKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPVPKKPRTIHVKIA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00723 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 12 155 IPR031107 -
Lapu8g00723 158 SUPERFAMILY HSP20-like chaperones 32 149 IPR008978 -
Lapu8g00723 158 Gene3D - 5 157 IPR008978 -
Lapu8g00723 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 156 IPR002068 -
Lapu8g00723 158 FunFam 17.3 kDa class II heat shock protein-like 11 157 - -
Lapu8g00723 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00723 Lapu-Chr8 25192215 25193185 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00723 K13993 - gmx:100813195 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00723 8 25192215 25193185 Lapu8g00723 8 25192215 25193185 ECH