Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00650 ATGGCTTCTTCTATTCTCTCTGCAGCTTCGCATTCTCTCTCTCCCTCTTATTCCATCTCCTCGCTCCAAACCCACCCGGGGAAGCCCAAGATTGGAGGCAACACTTTGAGATTTAACAACGGACTCAACTCATTTCCAAATGCAAGGTCTATTGGTAGGGTCTCTATGGCTGTTGCAGTTAATGTTTCTCGGTTTGAGGGCATACCTATGGCTCCTCCTGATCCAATTCTTGGAGTTTCTGAGGCATTTAAAGCGGACACAAGTGATGTCAAGCTCAATCTTGGAGTAGGGGCATACCGAACAGAAGAACTACAGCCATATGTACTTAATGTTGTTAAGAAGGCAGAGAATCTTATGCTGGAGAGGGGCGATAACAAAGAGTATCTCCCTATTGAGGGTTTGGCTGCGTTTAACAAGGCAACTGCGGAGTTGTTACTTGGAGCAGACAACCCAGCAATCAAACAGCAAAGAGTTGCCACTGTTCAAGGTCTTTCTGGAACTGGTTCTCTGCGGTTAGGTGCAGCTCTGATAGAAAGATATTTTGCTGGGGCTAAAGTTTTGATATCAGCTCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTAAAGTGCCATGGTCTGAGTACCGATATTATGATCCCAAGACAGTTGGCTTGGATTTTGAGGGCATGATTGAAGATATAAAGTCAGCTCCCGAAGGATCTTTTGTTCTACTACATGGATGTGCTCATAACCCTACTGGTATTGATCCAACACCTGAACAGTGGGAAAAAATAGCTGATGTAATTCAAGAAAAGAACCACATTCCCTTTTTTGATGTTGCTTACCAGGGCTTTGCCAGTGGAAGCCTTGATGAAGATGCAGCTTCTGTCAGACTGTTTGTTGCACGTGGTATGGAGGTTCTTGTGGCTCAGTCATACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAATTAATGTAATTTCATCATCTCCAGAATCTGCTGCAAGGGTAAAGAGCCAGTTGAAAAGGCTTGCCCGACCAATGTACTCTAATCCACCAGTACATGGGGCTAGAATTGTTGCCGATGTTGTTGGAAACCCAGTTCTCTTTAATGAATGGAAAGCAGAAATGGAAATGATGGCTGGAAGGATCAAGAATGTTAGGCAACAGTTATACAATAGCATTACTTCAAAAGACAACAGTGGAAAAGATTGGTCATTTATACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGGACCAGAGTGACAATATGACAAATAAGTGGCATGTATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCTTTGGCTAAATGTGAATACCTTGCAGATGCTATTATAGACTCGTATCATAATGTCAGCTGA 1398 0.4292 MASSILSAASHSLSPSYSISSLQTHPGKPKIGGNTLRFNNGLNSFPNARSIGRVSMAVAVNVSRFEGIPMAPPDPILGVSEAFKADTSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFAGAKVLISAPTWGNHKNIFNDAKVPWSEYRYYDPKTVGLDFEGMIEDIKSAPEGSFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRLARPMYSNPPVHGARIVADVVGNPVLFNEWKAEMEMMAGRIKNVRQQLYNSITSKDNSGKDWSFILKQIGMFSFTGLNKDQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00650 465 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 307 320 IPR004838 GO:0003824|GO:0009058|GO:0030170
Lapu8g00650 465 PRINTS Aspartate aminotransferase signature 406 424 IPR000796 GO:0006520|GO:0008483
Lapu8g00650 465 PRINTS Aspartate aminotransferase signature 337 362 IPR000796 GO:0006520|GO:0008483
Lapu8g00650 465 PRINTS Aspartate aminotransferase signature 269 281 IPR000796 GO:0006520|GO:0008483
Lapu8g00650 465 PRINTS Aspartate aminotransferase signature 238 257 IPR000796 GO:0006520|GO:0008483
Lapu8g00650 465 PANTHER ASPARTATE AMINOTRANSFERASE 58 463 IPR000796 GO:0006520|GO:0008483
Lapu8g00650 465 FunFam Aspartate aminotransferase 123 364 - -
Lapu8g00650 465 Gene3D - 123 364 IPR015421 GO:0003824
Lapu8g00650 465 Pfam Aminotransferase class I and II 91 457 IPR004839 GO:0009058|GO:0030170
Lapu8g00650 465 SUPERFAMILY PLP-dependent transferases 63 459 IPR015424 -
Lapu8g00650 465 CDD AAT_like 92 457 - -
Lapu8g00650 465 Gene3D Aspartate Aminotransferase, domain 1 68 457 IPR015422 GO:0003824
Lapu8g00650 465 FunFam Aspartate aminotransferase 351 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00650 Lapu-Chr8 24289310 24294059 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00650 K00811 - gmx:547792 850.892