Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00626 ATGGCTTCCAACAAGCTTATTGCCACCATCTTGGTGCTTTCTCTCCTTGCCTACTCAACATCCACCAATGCATGTGGCACATGCCATCCCAAGCCTTCTCCTCCTCCTCCATCAGGGAAGTGTCCAAAGGACACACTAAAGCTAGGGGTTTGTGCTGACATTCTAGGACTCGTTAATGTTGTTGTTGGCTCACCTGTCTCCAGCAAGTGTTGTGCATTGCTTCAGGGTTTGGCTGATCTTGAGGCTGCACTTTGCCTATGCACTGCCATCAAAGCCAATGTGCTTGGAATCAACTTGAATGTTCCTATCACACTCAGTGTGCTACTCAGTGCTTGCCAAAAAACTGTTCCTTCTGGCTTCCAATGTGCATAG 372 0.4812 MASNKLIATILVLSLLAYSTSTNACGTCHPKPSPPPPSGKCPKDTLKLGVCADILGLVNVVVGSPVSSKCCALLQGLADLEAALCLCTAIKANVLGINLNVPITLSVLLSACQKTVPSGFQCA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00626 123 Pfam Hydrophobic seed protein 41 123 IPR027923 -
Lapu8g00626 123 CDD HPS_like 44 122 IPR027923 -
Lapu8g00626 123 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 44 122 IPR036312 -
Lapu8g00626 123 PANTHER - 6 122 - -
Lapu8g00626 123 Gene3D - 40 123 IPR036312 -
Lapu8g00626 123 SMART aai_6 41 122 IPR016140 -
Lapu8g00626 123 FunFam pEARLI1-like lipid transfer protein 1 39 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00626 Lapu-Chr8 23955450 23956257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00626 32 122 Acyl Lipid Metabolism Gene Families AT4G22490 38.710 4.32e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00626 - - gmx:100306307 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00626 8 23955450 23956257 Lapu8g00626 8 23955450 23956257 ECH