Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00621 ATGTCCCACCACCAATCCACCTTCATACCACCCAATCCCAACACCCCTACCCGCTCCTCCCTCGCCGTCATCCCCGCCATCTTCGCCGGAAAAACCCTCTTCTACCACCGACTTCCCTCCCTACCCCTCCGACTCACCGTCCTCAAACTCGACGGTTCCTCCTTTCATATTCAGGTTTCCAAGACCGCCACTGTTGCCGAACTCAAAGACGCAGTCGAGGCTGTTTTCGCCCACGCGCCTCTCAAGGGCCCCGCCAAAATTTCGTGGGCGCATGTTTGGGGGCAGTTTTGCTTATGCTTTAATGGACAGAAGCTAGTTACTGAGAATGATTATCTTCGAAATTATGGCATCAAGGACGGTGACCAGCTTCGTTTCATCCGCCATGTTTCAAACAATTGCTGTGTCCAAAGAAAGCGGGTGAAGAAAAGAATTGTCTATTTGAAACAGCACAGGAGATTGGTTATATGCAAGGTGCAGGTCTTCTCACAAAGGAAAGTGTGA 501 0.509 MSHHQSTFIPPNPNTPTRSSLAVIPAIFAGKTLFYHRLPSLPLRLTVLKLDGSSFHIQVSKTATVAELKDAVEAVFAHAPLKGPAKISWAHVWGQFCLCFNGQKLVTENDYLRNYGIKDGDQLRFIRHVSNNCCVQRKRVKKRIVYLKQHRRLVICKVQVFSQRKV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00621 166 CDD Ubl_SNRNP25 43 128 IPR040610 -
Lapu8g00621 166 SUPERFAMILY Ubiquitin-like 42 134 IPR029071 -
Lapu8g00621 166 Gene3D - 40 136 - -
Lapu8g00621 166 Pfam Ubiquitin-like domain 43 129 IPR040610 -
Lapu8g00621 166 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 28 152 IPR039690 GO:0000398|GO:0005689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00621 Lapu-Chr8 23882513 23885733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00621 - - gmx:100820296 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00621 8 23882513 23885733 Lapu8g00621 8 23882513 23885733 ECH
Lapu9g01900 9 33783024 33786787 Lapu8g00621 8 23882513 23885733 ECH
Lapu8g00621 8 23882513 23885733 Lapu9g01900 9 33783024 33786787 PCT