Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00616 ATGGATGAAGCTTCTAGAGGACTAAGAACTCAAGACCAAACAGTGACTAAAGTGGATGGATCAGAAGATTTCTGGAGCAGCAGCACCTTTGAATTAGACCACAGTGCAGCTCACTCGCAGAGAAGCATCTCATCAATCGGAATATCAAATAATCCCTCAGATCCTCAAAATAGTGGAGGCAGTCAAAGTGGTCCTCCTGAATTTGTCAACCATGGGCTTCTTCTCTGGAACCAGATAAGGCAACAATGGATAGGAAACAAAGCGTCTGAGAGTATCACAGAAATTCAAGAACCAAGAATAAGTTCCAATGCCACCTATGACACCCTACTTGGGAGCAACAAGCCCTTTCCCCAACGGATACCTTTGAGAGAAATGATTGACTTTCTTGTTGATGTTTGGGAGCAAGAGGGTCTGTATGACTGA 423 0.4397 MDEASRGLRTQDQTVTKVDGSEDFWSSSTFELDHSAAHSQRSISSIGISNNPSDPQNSGGSQSGPPEFVNHGLLLWNQIRQQWIGNKASESITEIQEPRISSNATYDTLLGSNKPFPQRIPLREMIDFLVDVWEQEGLYD* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00616 140 MobiDBLite consensus disorder prediction 36 65 - -
Lapu8g00616 140 MobiDBLite consensus disorder prediction 1 20 - -
Lapu8g00616 140 Pfam Protein of unknown function (DUF4050) 100 140 IPR025124 -
Lapu8g00616 140 Pfam Protein of unknown function (DUF4050) 28 96 IPR025124 -
Lapu8g00616 140 PANTHER OS07G0479600 PROTEIN 4 140 - -
Lapu8g00616 140 MobiDBLite consensus disorder prediction 36 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00616 Lapu-Chr8 23790469 23794010 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00616 - - gmx:100793281 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00616 8 23790469 23794010 Lapu8g00616 8 23790469 23794010 ECH
Lapu3g00838 3 9032919 9037124 Lapu8g00616 8 23790469 23794010 ECH