Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00564 ATGAGAGAGAGAAAGTGTGTGTGTGATAGTACAGATACACAGTACTGTGCTCTGCACTGCACAAGTTTCACACACACTTTCTCATTTTATTACTGCATTTGGAGTTCTTCTCTCTGCACCATCATCTCTCTGAAGGTTCTAGAGCACGTAGAGAGAAAACCCAGGTGTTGTTTTGAGATAATAATGTTGAGGAAGAGGACCAGGTCAATCCAGAAAGATCAACAGCAAGCTGGCAAAATGGCAATCTCTGAAGCCAATTTTGAGTCCTATTCTCAGTCTCATGGTTTGGGGAGCAATGCCAAAAGCAACGCAATTTTCAATGCCCCCCTTCTGTTTGTGGGTATGGGTCCTAAGGGCTTGTTGGATTCTGATTCTGTTAAGAGTCCCACTTCCCCACTAGATATTTCATTCTTTTCAAATCTTAGTAATCCCTTTAGAACCCCAAGTTCATTGTCCAACGAGGGGCAACAAAGGAGCTGGGACTGTGCCAAAGTAGGTCTGAGTATTATAGATTCTTTGGAAGAATGTTCTAAGTTTTCTAGAAAAATTTTCCAAGCCTCTGAGAGCAAGAAGACTAGTCTCAGTCCCCAAATGATTACTAAAGCCCCAAATTGCAAACCCTATATGGATATGGATTCTGCTCAGGCATCTAAATCTTTACCCAAAGATTTTTGTAAGATTCATTGTACTCAAAATGGTTATATTTTCTCCAAGGGTGAGTCCACTGTTGTTTTTGAGATTGGAGAGACCCCACTAGAACATGAGTCCTTTGGAAAAACTGTGTCTGTTTCATTGGATTCTTGCAGTCCAATTAGAAATCTGTCTGGTTTAACTGGTCCCAACATTGATTCTGAGCCTGAGAATCTTGCTTTAAAACACATGTGCTCCCCTCCTCATTTTATTGGAGGAAGCCATGATAACACACAAATTTTGCTACCTGCTGAATTAAGTTCAAATCCTACTACTGCTGCCGCTTTATCTTCTAATGAATTTATAAAGTCCCTATCAGCTAGTGAGATTGAACTCTCTGAGGATTACACCTGTGTGATATCCCATGGTCCCAATCCTAAAACAACCCATATTTTCTGTGACTGCATTTTGGAAACTCATGCAACTGATTTTAGAAAACATAACAAGAGTGAAGAGGAGGGAAAGGAAATGTCCCTTTTCAATGTTAACTGCATGCATACTCCAAACCATTTTCCTTCTAAAGACTTCTTAAGTTTCTGCCACCATTGCAACAAAAAGTTGGAAGAGGGAAAAGATATTTACATATATAGAGGTGAAAAAGCATTTTGCAGTTTGAGCTGCCGGGCAATAGAGATCATGATTGATGAGGAGCTAGAGAAATCTGATTCATCACCTGAAATCTCTCCAAAGTGA 1383 0.4006 MRERKCVCDSTDTQYCALHCTSFTHTFSFYYCIWSSSLCTIISLKVLEHVERKPRCCFEIIMLRKRTRSIQKDQQQAGKMAISEANFESYSQSHGLGSNAKSNAIFNAPLLFVGMGPKGLLDSDSVKSPTSPLDISFFSNLSNPFRTPSSLSNEGQQRSWDCAKVGLSIIDSLEECSKFSRKIFQASESKKTSLSPQMITKAPNCKPYMDMDSAQASKSLPKDFCKIHCTQNGYIFSKGESTVVFEIGETPLEHESFGKTVSVSLDSCSPIRNLSGLTGPNIDSEPENLALKHMCSPPHFIGGSHDNTQILLPAELSSNPTTAAALSSNEFIKSLSASEIELSEDYTCVISHGPNPKTTHIFCDCILETHATDFRKHNKSEEEGKEMSLFNVNCMHTPNHFPSKDFLSFCHHCNKKLEEGKDIYIYRGEKAFCSLSCRAIEIMIDEELEKSDSSPEISPK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00564 460 Pfam zinc-finger of the FCS-type, C2-C2 400 447 IPR007650 -
Lapu8g00564 460 ProSiteProfiles Zinc finger FLZ-type profile. 405 449 IPR007650 -
Lapu8g00564 460 PANTHER FCS-LIKE ZINC FINGER 11 62 459 IPR044585 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00564 Lapu-Chr8 23022105 23024928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00564 - - vum:124831358 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00564 8 23022105 23024928 Lapu9g01831 9 33178323 33181032 PCT