Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00556 ATGGCGATGCTTTCGAAGATATCATCCTCACTCTTTCTCTCACTCTCCCTCAAACCTAAACTCTTCTATCGCACCAATGTCTTTCTGCTTTCTCGTTCAACCGCCACCACCTCAAACCACAAGAAGAACGACAACGCAAAAGCAGGTTTGGCCAAGGAGAAGCGCAGAACCCGCTCAGACAAACACTTCAACCCAGACGCAATAATTCAGCATTGCAACGTTAACGACTCCGACGCCAAGTTCTCTCACATTCCGGTCATGCTGGGCGAAGTCATGGACGTCTTCTCCGCCGTTTCCTTAACCTCCTTCGTTGATTGCACACTCGGCGCTGCCGGTCACTCCACCGCCGTGATCAGGGGTCATCCTGAGATGAAGTTTTTCGTGGGGATGGATGTGGACTCTGTGGCACACGACATTGCGCAGCCACGCCTTGATGCCGTTTTAAGTGGTGATGTCAAAGCGTTTACCGTTTTGAGGAATTTTAGAGATGTCAAGTCTGTGCTTAGAGAATTCACTGACTTACAGAAGGGGGTTGATGGCATCTTAATGGACTTGGGAATGTCGTCTATGCAGGTAGACAATCCTGGGAGAGGATTCAGTGTGCTCAGTGATGGACCCCTTGATATGCGGATGGATCCTCAGGCAAGTCTTAAAGCAGAGGACATATTAAATTCCTGGCCAGATTCTGAAGTGGGCCGTATCCTAAGAGAATATGGAGAAGAAAGTAATTGGCGAACCCTGCAAAAGAAAATTGTCAATGCCCGATTACATGGTGGATTTCACTCGACCACTGATTTGCTAGATCTTATTAAGCGTGTGACTCCTCCAATGAAAGGTGGAAGACAAGGTTGGATAAAGACGGCAACCCGGGTTTTTCAAGCTCTGAGAATTGCCGTTAATGATGAACTGAAGACACTTGAGGATTCCCTCTATTCTTGTTTTGATTGCCTGGCACCCAGGGGTAGACTTGCTGTCATATCTTTTCATAGTCTAGAGGACAGAATTGTGAAGCAGACATTTCTTAATATAATTAAAGGGGGCGAAGATGTGGAAGAAAGGGAGAGCCTCAACAGTGAATTAAGGAAGACCAGTGATGAAATCAAAGAAAAAGAAGCATGGATAAAGCAAGTAATACATGGGTTAAATGGAACAATTCTCACAAAAAGACCAATCACACCGTCAGGAGAAGAAGAAAAATTGAACCGCCGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAGAAGCACTGA 1248 0.4591 MAMLSKISSSLFLSLSLKPKLFYRTNVFLLSRSTATTSNHKKNDNAKAGLAKEKRRTRSDKHFNPDAIIQHCNVNDSDAKFSHIPVMLGEVMDVFSAVSLTSFVDCTLGAAGHSTAVIRGHPEMKFFVGMDVDSVAHDIAQPRLDAVLSGDVKAFTVLRNFRDVKSVLREFTDLQKGVDGILMDLGMSSMQVDNPGRGFSVLSDGPLDMRMDPQASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKIVNARLHGGFHSTTDLLDLIKRVTPPMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPRGRLAVISFHSLEDRIVKQTFLNIIKGGEDVEERESLNSELRKTSDEIKEKEAWIKQVIHGLNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKH* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00556 415 MobiDBLite consensus disorder prediction 37 58 - -
Lapu8g00556 415 Gene3D Putative methyltransferase TM0872, insert domain 195 302 IPR023397 GO:0008168
Lapu8g00556 415 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 83 415 IPR002903 GO:0008168
Lapu8g00556 415 FunFam Ribosomal RNA small subunit methyltransferase H 195 302 - -
Lapu8g00556 415 SUPERFAMILY Putative methyltransferase TM0872, insert domain 197 300 IPR023397 GO:0008168
Lapu8g00556 415 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 83 414 IPR029063 -
Lapu8g00556 415 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 80 414 IPR002903 GO:0008168
Lapu8g00556 415 Gene3D Vaccinia Virus protein VP39 83 412 IPR029063 -
Lapu8g00556 415 Pfam MraW methylase family 81 414 IPR002903 GO:0008168
Lapu8g00556 415 NCBIfam 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 80 414 IPR002903 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00556 K03438 - gmx:100787277 682.174