Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00548 ATGAGTTTCAAAAGCTCTTCTCTTCTCTGCATAGCACTTTTGCTTGCATGCTCTTCTGCTATTTATGGCTTTGACATAACGAAAATGTTAGAAAAAGAACCAGAGTTTTCCACATTCAACAAGTACATCACCGAAGCCAAGCTTGCAGACCAAATAAACAGCCGCAACACCATCACTGTCCTGGCTCTTGATAACAATGCTATCTCTTCCATTTCTGGGAAGTCCCCAGAAGCCATTAAGGCCATCATCAGCACCCATGTGCTCCTTGACTTCTATGATGACAAGAAGCTCGTGGAAGCACAAGGTAGCAGCCTATCATTGACAACCCTCTACCAGTCCTCAGGCCTTGCCCTCAAGCAACAAGGTTTCGTCAATGTTTCACTCGTCGGCGAGGGCGAAATCGCCTTCAGCTCCGTCGGCTCTTCCGACTACTCCGAGCTCGTCAGAACCGTCACCTCCGAACCCTACAACATCTCCATTCTTGAAGTCACCAAGCCCATCATACCCGTAGGTCTTGATTCTCAAACCCCATCTGCACAATCGCCTCAACAAGCTAAAGCCTCTCCCCCACCCAAACAGAGTGCCAAGGCACCTGCAAAGACCGCTGAGGCACCTGCAAAGACCGCTGAGGCACCTACAAAGACCGCTGAGGCACCTGCAAAGACCGCTGAGGCACCAACTTCAGTAAAGGATGCAAAATCTCCTTCTCCAGCAAAGACTGCTGATGCGCCAGCTCCTTCCAACGCTTCTGCCGCGCCTTCACCCAGTGAAACCGCTGCCGAGTCTCCCTTGGAGGATGCCGAGGCCCCAACAACCGCTGCTGAAGGTCCCGTGGCTGATGAGGATGGTGCTGCAGATACTGCTGAGAGCAGCTCTTCAACTATTAAGATGGGTTTGGCAGGAGCAGTGGTGGCCTTCGCTTCCTTCTTCATCGCCATGAATCGGCTTCTGAAAATAGATTTTTAA 966 0.5104 MSFKSSSLLCIALLLACSSAIYGFDITKMLEKEPEFSTFNKYITEAKLADQINSRNTITVLALDNNAISSISGKSPEAIKAIISTHVLLDFYDDKKLVEAQGSSLSLTTLYQSSGLALKQQGFVNVSLVGEGEIAFSSVGSSDYSELVRTVTSEPYNISILEVTKPIIPVGLDSQTPSAQSPQQAKASPPPKQSAKAPAKTAEAPAKTAEAPTKTAEAPAKTAEAPTSVKDAKSPSPAKTADAPAPSNASAAPSPSETAAESPLEDAEAPTTAAEGPVADEDGAADTAESSSSTIKMGLAGAVVAFASFFIAMNRLLKIDF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00548 321 ProSiteProfiles FAS1/BIgH3 domain profile. 23 148 IPR000782 -
Lapu8g00548 321 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 303 IPR033254 -
Lapu8g00548 321 MobiDBLite consensus disorder prediction 172 289 - -
Lapu8g00548 321 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Lapu8g00548 321 SUPERFAMILY FAS1 domain 30 169 IPR036378 -
Lapu8g00548 321 MobiDBLite consensus disorder prediction 241 257 - -
Lapu8g00548 321 Gene3D FAS1 domain 24 169 IPR036378 -
Lapu8g00548 321 FunFam Fasciclin-like arabinogalactan protein 3 23 167 - -
Lapu8g00548 321 Pfam Fasciclin domain 34 120 IPR000782 -
Lapu8g00548 321 MobiDBLite consensus disorder prediction 172 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00548 Lapu-Chr8 22830671 22832337 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00548 - - pvu:PHAVU_001G058300g 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00548 8 22830671 22832337 Lapu8g00548 8 22830671 22832337 ECH