Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00544 ATGGATTCCATCTATGCGAGCTCGTCATGCACTGTTCCTCACCTTCTCCGTCGCGACACTCCACTACTGCCGCCGCGAACCTCGAGTTCGGTTGCTCCATCTTCGCTTCGGCGAGCGAAGAAGCCGCGGCGCGTTCGAGTTTCGAGTTCCGCCACAACGAACGACGCCGTTTCGAGGGCGCTGCAGGGAGTGAGCAGCACTGCGCTGGAGCAGCTCGACATCGAGCGTGGCGTCTGCATCCCTTTCCGCAAGTATTCGCCCGAGATCGTGAGGAGTAAGGTGTTAGAATCAAGAGGATCCATTTTGTCACTTATGTTGCGTGGGGTGGAGATAGTTTGGAGTCTGGGCTTGTACTGGTCGAATTTGGTGTATGATTTCCTGGTTGGAAGGGATGAAGAGGTTGTTCCATATCGTGCTCGACAGCTTAGGAACCTCTTGTGTGATCTGGGGCCTTCCTTTATTAAAGCTGGTCAGGTCCTTGCAAACAGGCCAGATATCATTCGAGAAGATTATATGAATGAACTTTGCATCCTTCAAGATGATGTTCCTTCATTTCCCAATCAAATTGCCTTCAGAATCATAGAGGAGGATCTGGGTCAACCCCTTGAAGCTGTTTTCAGCAAAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGAGCTACATTACGTGCCACTGGCGAGGATGTTGCTATCAAGGTTCAGAGGCCTGGGATAGAGCCCATCATATATCGGGATCTTTTCCTATTCCGCACTTTGGCTTCATTCTTAAATGGCATCAGTATGCAGAAACTGGGATGTAATGCTGAGCTGATTGTTGATGAATTTGGTGAAAAGCTTTTGGAAGAGCTTGATTATACCCTGGAAGCCCGTAATCTGGAAGACTTTCTTGAGAATTTTAAAAATGACCCTACTGTCAAAATTCCCAGGGTTTATAAACAATTTTCTGGTCCACGTGTGCTGGTAATGGAATGGATTGATGGTATCAGGTGCACCAACCCACAGGCTATCAAAGAAGCTGGTCTTGATGTAGATGGATTTTTAACAATTGGGGTGAGTGCTGCCTTACGACAGTTGTTGGAATTTGGATTATTTCATGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGTGATGGGCGAATTGCATATGTGGACTTTGGCAATGTTGCTGTACTCAGTCAGCAAAATAAACAGATTTTAATTGATGCTGTTGTCCACGCTGTGAATGAGGACTATGCTGAGATGGCTAATGATTTCACCAGATTAGGCTTCCTGTCACCAGGGACTGATGTCACTCCTATTATTCCTGCTTTGGAAGCAATTTGGCAGAACTCTGCTGGAAAAGGACTGTCAGATTTTAATTTTCGTAGTGTCACCGGAAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATCCCAGAAAGGTTTTCACTTGTTATTCGATCCTTATTGACCCAAGAAGGCATCTGTTTTACCCTGAAACCTGACTTCAAATTTCTTGAGGTTGCCTATCCTTATGTGGCTAAGCGACTACTGACAGACCCAAATCCAGCTCTACGTGAACGCCTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGACTTGAAAACCTTATTGTTCTTGCTAAGGAAAATGTGGCGAAGATGAGTAACAATCCAGCGTTGAAAGTGAAAGACAAGCAAATCCAGAGAGACTGGAAAGTTGAAAGAAAATTGGACCTCACTGACACAATCAAAGATGGAGCTCGCCTTTTCTTTGTTGATGAAGGAATACGCAGACAGCTTCTTCTTGCTTTGACTGAGGATTCAAAGCTTCATGTTGAAGAGCTTGTCGATGTGTATAGATTGGTTGAAGATCAGATAGACATACCTTCTGTGGCTGTAGAAGTAGCTAGAGACTTACCAACAGTTGTCAGGGATCTCCTACTTTCATGGAGTGAGTCAATCTTGTCTGATAGATAG 1989 0.4495 MDSIYASSSCTVPHLLRRDTPLLPPRTSSSVAPSSLRRAKKPRRVRVSSSATTNDAVSRALQGVSSTALEQLDIERGVCIPFRKYSPEIVRSKVLESRGSILSLMLRGVEIVWSLGLYWSNLVYDFLVGRDEEVVPYRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPSFPNQIAFRIIEEDLGQPLEAVFSKISSETIAAASLGQVYRATLRATGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISMQKLGCNAELIVDEFGEKLLEELDYTLEARNLEDFLENFKNDPTVKIPRVYKQFSGPRVLVMEWIDGIRCTNPQAIKEAGLDVDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLSPGTDVTPIIPALEAIWQNSAGKGLSDFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSNNPALKVKDKQIQRDWKVERKLDLTDTIKDGARLFFVDEGIRRQLLLALTEDSKLHVEELVDVYRLVEDQIDIPSVAVEVARDLPTVVRDLLLSWSESILSDR* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00544 662 CDD ABC1_ADCK3-like 178 424 - -
Lapu8g00544 662 MobiDBLite consensus disorder prediction 18 51 - -
Lapu8g00544 662 SUPERFAMILY Protein kinase-like (PK-like) 179 417 IPR011009 -
Lapu8g00544 662 Gene3D Transferase(Phosphotransferase) domain 1 205 406 - -
Lapu8g00544 662 Pfam ABC1 atypical kinase-like domain 178 422 IPR004147 -
Lapu8g00544 662 ProSiteProfiles Protein kinase domain profile. 208 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00544 662 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 82 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00544 Lapu-Chr8 22773221 22784914 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00544 - - gmx:100819754 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00544 8 22773221 22784914 Lapu8g00544 8 22773221 22784914 ECH
Lapu9g01195 9 25660856 25675900 Lapu8g00544 8 22773221 22784914 PCT