Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00538 ATGCAACCCCAGCTCAGTTCAAGAATCAATTTGGTCGAATTAAAAGCACAGATTGTTAAGAGGATTGGGGCGGAGAAGTCGAAGCAATACTTTTATTACTTGAACAGGTTTCTGAGTCAGAAGCTGAGCAAGAGTGAATTTGATAGGTCATGTTATCGGGTACTTGGCAGGGAGAATCTTCCGTTACACAATCACTTCATAAAGTCAATTTTGAAGAATGCCTGCCAAGCCAAGACCCCACCGCCAGTCCAGCAACTGACAGGTCCTCCAAAATCTGGAACACTTGTCAATCATGCATCTCCCGGTCGAGAAGATGGACACGAACATAGTGTTGTTAACTTCCAAAATCAGAATGTTTCCATTTGGTCCAATGGGGTTTTGCCAGTTTCCCCACGTAAGTTAAGATCTGGAGTGCGTGATCGAAAACTTAAAGATAGACTGAGCCCTCTTGGACCAAATGGAAAAGTTGATTCTGTTGCTCATCAATCCACAGCTACAGAAGACAGTGGCAGTAAGGTTGATATGGAGAATGAAATTCTTACTCCATGCGATTATCAAAGGCCAACAAAACATCTTCAGGTAGTTGATGAGCTACTTGAGAATGGTATTGTGGATGCTCTTCAGAGACCTGCTGAGAAACCAAGAATACATGGCCAAGGACCAACCGATGTATCAATTATTGAAGATGGTGAAGAGGTGGAGCAGTTAAACCGCCGCAAATTCTCTAGAAGTCCCTTGGTAGCACCACTTGGGATTCCCTACTGCACCACAAGTGTTGGTGGGGCCCGCAAAGCATTGCCAGTGAATAGCACTAGTAATATTGTTAGTTGTTGTGACAGTGGTAGGTTATATAATACAGATACATTGAGAATGCGCATGGAGCAGATTGCCACAGTACAGGGTCTTGGAGGTGTTTCTATGGAATGTGCAAATACATTGAATAATATGTTAGATGTGTACTTGAAAAGGTTGATCAGACCTTGTGTTGATTTAGTGGGAGCTAGGTCTGCAAATGAACAGAGGAAGCTCTCTGTCTCGAAACAGCACATTCAGGGGAAGGTCATTAACGGTGTATGGCCAAATAATCATTTACATGTGCAGAATGCCGGTGGGCTGGCAGAACCTGAGGCTGGGCACACACCACCACACTCGGTATCTTTACATGATTTTAAAGTTGCTATGGAGCTAAATCCGCAGCTACTTGGAGAAGATTGGCCCGTACAATTGGAGAAAATTTCTATGCAATTATTTGAGGAATGA 1260 0.4349 MQPQLSSRINLVELKAQIVKRIGAEKSKQYFYYLNRFLSQKLSKSEFDRSCYRVLGRENLPLHNHFIKSILKNACQAKTPPPVQQLTGPPKSGTLVNHASPGREDGHEHSVVNFQNQNVSIWSNGVLPVSPRKLRSGVRDRKLKDRLSPLGPNGKVDSVAHQSTATEDSGSKVDMENEILTPCDYQRPTKHLQVVDELLENGIVDALQRPAEKPRIHGQGPTDVSIIEDGEEVEQLNRRKFSRSPLVAPLGIPYCTTSVGGARKALPVNSTSNIVSCCDSGRLYNTDTLRMRMEQIATVQGLGGVSMECANTLNNMLDVYLKRLIRPCVDLVGARSANEQRKLSVSKQHIQGKVINGVWPNNHLHVQNAGGLAEPEAGHTPPHSVSLHDFKVAMELNPQLLGEDWPVQLEKISMQLFEE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00538 419 PANTHER TRANSCRIPTIONAL ADAPTER 1 3 418 IPR024738 GO:0070461
Lapu8g00538 419 MobiDBLite consensus disorder prediction 137 171 - -
Lapu8g00538 419 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 332 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00538 Lapu-Chr8 22651050 22654583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00538 - - gmx:100811524 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00538 8 22651050 22654583 Lapu8g00538 8 22651050 22654583 ECH
Lapu8g00538 8 22651050 22654583 Lapu9g01812 9 32937150 32940225 PCT