Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02517 ATGGGATCGAAGGAAGAAACCGGCGGCGCCGAGAAGGCGAGCCTAGATGGCCTCCCTTCGGCTCTCGTGGCCACCGTCATGACGAAGCTGGATATCGCCTCCATCTGCTCACTCGCCTCCACCTCCTCCGCCTTCCGCTCTTGCGCCCGTCACATCCTCTCTTTCCTCCCCTCTTTCCATCTCCTCGACATTGCTCCATCCAGGGAGTTGCTCAGACCCTTGCTGCCGCCCAATCCCTACCTCACCACTCTCAGGCTCGATTGTTCCCGCCTCGATGACTCCGCCATCGCCTTCCTTCTCAAACCCTCCCTCCATGATCTCTCTCTCCACAATTGCGCCGATTTCAGTGGCAGACTCTTATCTGAGATCGGCACCCGCTGCAAGGATCTAAGGTCTCTTTACCTTGGCTCCGTCGCCGAGAAGAGAGGGAGGGCCATTCATATTTCCGATCTGCAGGAGTTGCTCAGCGGTTGCTCCCACTTGGAAGCATTGATTCTGATGTTTGATGTTTCTCTCTTTCTACGTCACAACTTTGCTCGAGTGTGGGCTTCTGCCTCAGAGAAACTTACTTCTCTCGAGATTGGCTACATTTCTTCTGTTACCGTCACTGAACTCCTGAGCCCAAATTTGGGATCCCATCTGCCCACAAATCCTGTTCAGCCCTCCATACTTCCTAGCATTCAGAAACTATGTCTTAATGTAGACTATATAACTGATGCTATGATTGGCACAATATCCAAAGGTCTAATCTTTTTAACACATTTGGATCTTCAAGACGCACCATTGATTGAACCAAGGGTTACATTTGACTTAACCAATGCTGGTCTTCAACAAATTAATCAACTTGGGAGATTGAAACATCTTTCATTGGTTCGAAGCCAAGAGTTTCTTATTACCTACTTTCGAAGAGTGAATGATCTGGGATTACTTCTAATGGCAGACAAGTGTGCAAACATGGAAAGCATATGCCTTGGTGGCTTTTGTCGTGTCACAGACACCGGTTTCAAAACTATCCTGCATTCTTGCACTCGTTTATACAAGCTTAAGGTCACTCATGGGACTCATTTAACTGATCTAGTTTTTCATGATATTTCGGCTACATCCCTTACTTTGACACATGTTAGCTTAAGACGGTGCAATCTGTTAACTAATCATGCTGTTTTGAGTTTGGCATCAAACAAGGAACTCAAGATTCTTGACCTGAGAGACTGCAGAAGCCTTGGGGACGAGGCTCTCCAGGCCATTGGCACTCTGCCTAGACTGAAAATTTTACTATTAGATGGCTCTGATATAACTGATGCAGGACTTTTGTACTTAAGATCGTCTGTTATTGGTTCACTGTATGCACTGTCTCTTCGCGGCTGCAAGAGACTAACAGATAAATGCATCACAGCTCTATTTAATGGCTGCCGTGTGCTGGAATTGCGAGAACTGGATCTATCTAATCTTCCTAACCTCTCAGATAATGGAGTTCTGCTGCTGGCGAAAAGTCGGATTCCCTTCTTTGAACTCCGTATGCGACAGTGCCCTCTAGTTGGTGATACTGCAGTCATGGCATTAGCTTCAATGCTAATTGACGAGGCCAAACATGGAAGCAGTTTGCGCTTGTTGGATCTTTATAACTGTGGTGGCATTACAGCGCTTGCATTTCGCTGGTTGAAGAAACCATATTTTCCAAGGCTCAAATGGTTGGGAGTGACAGGAAATGTTAATAGAGACATTGTAGATGCTTTAGCCAGAAGCAGACCTTTCTTACATGTGGCATGCCATGGTGAGGAGCTTGGGGCTGATCCCTATGACACTTCAGATGGATTATATACACATGATTATGATGACGTGGATGAATTTGAGCAGTGGCTTCTCGAAGCAGATATTGATAGTGACTATGAAGAGATGGGCGATGCTGAAAATAATGATGAAATGATTATGTGA 1932 0.4617 MGSKEETGGAEKASLDGLPSALVATVMTKLDIASICSLASTSSAFRSCARHILSFLPSFHLLDIAPSRELLRPLLPPNPYLTTLRLDCSRLDDSAIAFLLKPSLHDLSLHNCADFSGRLLSEIGTRCKDLRSLYLGSVAEKRGRAIHISDLQELLSGCSHLEALILMFDVSLFLRHNFARVWASASEKLTSLEIGYISSVTVTELLSPNLGSHLPTNPVQPSILPSIQKLCLNVDYITDAMIGTISKGLIFLTHLDLQDAPLIEPRVTFDLTNAGLQQINQLGRLKHLSLVRSQEFLITYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGFKTILHSCTRLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASNKELKILDLRDCRSLGDEALQAIGTLPRLKILLLDGSDITDAGLLYLRSSVIGSLYALSLRGCKRLTDKCITALFNGCRVLELRELDLSNLPNLSDNGVLLLAKSRIPFFELRMRQCPLVGDTAVMALASMLIDEAKHGSSLRLLDLYNCGGITALAFRWLKKPYFPRLKWLGVTGNVNRDIVDALARSRPFLHVACHGEELGADPYDTSDGLYTHDYDDVDEFEQWLLEADIDSDYEEMGDAENNDEMIM* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02517 643 Gene3D Ribonuclease Inhibitor 62 474 IPR032675 -
Lapu7g02517 643 SMART LRR_CC_2 444 469 IPR006553 -
Lapu7g02517 643 SMART LRR_CC_2 368 393 IPR006553 -
Lapu7g02517 643 SMART LRR_CC_2 503 523 IPR006553 -
Lapu7g02517 643 SMART LRR_CC_2 316 341 IPR006553 -
Lapu7g02517 643 SMART LRR_CC_2 531 556 IPR006553 -
Lapu7g02517 643 SMART LRR_CC_2 394 418 IPR006553 -
Lapu7g02517 643 SMART LRR_CC_2 472 497 IPR006553 -
Lapu7g02517 643 SMART LRR_CC_2 101 126 IPR006553 -
Lapu7g02517 643 FunFam F-box/LRR-repeat protein 10 isoform A 52 468 - -
Lapu7g02517 643 PANTHER UNCHARACTERIZED 363 553 - -
Lapu7g02517 643 SUPERFAMILY RNI-like 304 570 - -
Lapu7g02517 643 Pfam F-box domain 16 52 IPR001810 GO:0005515
Lapu7g02517 643 SUPERFAMILY F-box domain 5 51 IPR036047 GO:0005515
Lapu7g02517 643 Pfam Leucine Rich repeat 393 415 IPR001611 GO:0005515
Lapu7g02517 643 SUPERFAMILY RNI-like 67 292 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02517 - - pvu:PHAVU_007G016400g 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02517 7 41573465 41576155 Lapu7g02517 7 41573465 41576155 ECH