Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02513 ATGAATGCCTTACAGTGTCATCACCAAGCCTTGTCATGGAGATGGAAACAACCTCCTGCCCCGGTTAAAACAATCAGAATGGACACTTCCACGCTAACCAAACAAGGCCAACGATTTCTGACAAAGCTAACCACCTCCGCCGCCGCCACCGACAACCTCATCCGAAGATTCGTCCAAGGTTCTCCCAAATCTGTTGTTCTCACCACTCTCTCGCACCTCCTCTCTCCCTCCACCTCCTATCCACAACTCTCTTCCCTCGCCCTCCCTCTCTACGGAAGAGCCACCCAAGCCCCGTGGTTCAGTTGGAACTCCACCACCGTGGCCGAGCTCGCCGCGCTCCTCCACATACTGGGCCAGCAGGCCCAATCCGAAGCCCTGATTTCCGAAGCCATTTCCAAGCTACAATCTCGCCAACGCGAACTCGTTGTTTTCTACGGCAAACTCGCGGATGCATACTCGAAACGGAAATCCGAAACCGGCTTCGACGTGGCTTACGGTTACCTCAACAACCTTCTCCAGACATCCAAATCTGTTCACGTGAAACACAGGGCCTACGAGTACATGGTGAGTGGGCTGTGTTCCATGGACCGGCCCCGTGAGGCAGAGGATTTAGTTATTGGGCCTGGGATTGGGCTTGGGATTAAACCCTCGGCTTTTGAATTGAAGTCGGTTGTGTACGGATACGGAAGGGTGGGGTTGTTTGAGGATATGCGGAGAGTGGTGGAAGAAATGGAGAAGAGAGGTTTTGCTGTTGACACGGTTTGCTGCAACATGGTTGTTTCGGCTTACGGGGTTCACGGGGAGCACGGGGAAATGGTGAAGTGGCTTCGGAGGATGAGGGATTTGGGGGTTCCGTTCTCTGTTAGGACTTACAATTCCGTTTCGAATTGTTGCCCTAGGGTTTTGAGAATGGTGGGGGAACTGAGCGAATTGGCGTTGTCGATTGAGGAATTGAATGAGGGTTTGGAAGGAGGAGAGGGAATGGTGGTGAGGGAGTTGTTGGGGTGTAGTGGGATCTTGGAGGAGGTGATGGTGTGGGGGTCGTTGGAGGTGAAGCTGGATTTGCATGGGTTTCACTTGGGTGGGGCTTATTTGGTTGTGCTTGTTTGGTTGGAGGAGATGTGGAGAAGGTTGAGTGGTTTGAATAGTGGGGTTCCTGCGGAAGTTACGGTGGTTTGTGGGATGGGAAATCACAGCAGTGTTCGAGGGGAATCGAAGGTGAGAGTGCTGGTGCAGAAGATGATGGTGAATATGGGAAGTCCTTTGAAGGTTGATAGGAAGAACAATGGCTGCTTTATTGCTAAAGGAAAAGCTGTTCAAAATTGGTTGTGTCAAATGAGGAACCCACCATTCAGTGAACACCAATAG 1368 0.5175 MNALQCHHQALSWRWKQPPAPVKTIRMDTSTLTKQGQRFLTKLTTSAAATDNLIRRFVQGSPKSVVLTTLSHLLSPSTSYPQLSSLALPLYGRATQAPWFSWNSTTVAELAALLHILGQQAQSEALISEAISKLQSRQRELVVFYGKLADAYSKRKSETGFDVAYGYLNNLLQTSKSVHVKHRAYEYMVSGLCSMDRPREAEDLVIGPGIGLGIKPSAFELKSVVYGYGRVGLFEDMRRVVEEMEKRGFAVDTVCCNMVVSAYGVHGEHGEMVKWLRRMRDLGVPFSVRTYNSVSNCCPRVLRMVGELSELALSIEELNEGLEGGEGMVVRELLGCSGILEEVMVWGSLEVKLDLHGFHLGGAYLVVLVWLEEMWRRLSGLNSGVPAEVTVVCGMGNHSSVRGESKVRVLVQKMMVNMGSPLKVDRKNNGCFIAKGKAVQNWLCQMRNPPFSEHQ* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02513 455 ProSiteProfiles Smr domain profile. 353 437 IPR002625 -
Lapu7g02513 455 NCBIfam pentatricopeptide repeat 254 285 IPR002885 -
Lapu7g02513 455 NCBIfam pentatricopeptide repeat 223 252 IPR002885 -
Lapu7g02513 455 SMART SMR_2 350 437 IPR002625 -
Lapu7g02513 455 Gene3D - 351 435 IPR036063 -
Lapu7g02513 455 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 252 286 IPR002885 -
Lapu7g02513 455 SUPERFAMILY SMR domain-like 351 435 IPR036063 -
Lapu7g02513 455 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 217 251 IPR002885 -
Lapu7g02513 455 PANTHER OS03G0856100 PROTEIN 329 445 - -
Lapu7g02513 455 Gene3D Tetratricopeptide repeat domain 87 323 IPR011990 GO:0005515
Lapu7g02513 455 Pfam PPR repeat 223 249 IPR002885 -
Lapu7g02513 455 Pfam PPR repeat 254 284 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02513 40 296 Glycosyltransferase AT1G05670 23.256 5.13e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02513 - - gmx:100805233 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02513 7 41521222 41522670 Lapu7g02513 7 41521222 41522670 ECH