Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02510 ATGGAGGGGTTGGCAGGTTTGAGTCATCTTTTTGTGACCATATTCCTAACGGGATTCGGTTCTGTCATAGCTATTCCTTCCATCACAGACGTTACCATGGCTGCACTTTGCCCTGGTCAAGATCAGTGCTCCCTTGCCATTTACCTCTCTGGCATCCAACAAGCTATGGCTGGAGTGGGGTCAGTGGTGATGACACCATTAATTGGAAACTTGTCCGACAGATATGGAAGGAAAGCCTTGATCACCCTTCCTCTCACTCTCTCTGTCCTTCCTTATGTGATATTGGCATATAGCAGGGAGACCCAATTCTTCTATGCGTACTATGTAGTGAAAACTCTTGCTTCCATGGCAGGTGAAGGGTCCTTCCACTGCCTAGCTTTGGCATACGTGGCAGACAAGGTTCCAGATGGGAAACGAACATCAGCATTTGGGATACTTGCTGGTGTTGGATCAGCATCATTCGTTGGTGGAACATTAGCCGCTCGTTTCCTATCCACTGCCTTAACATTTCAGGTTGCTGCTGTCTCTTCAATGATTGCATTGGTGTACATGAGAATTTTCCTTAAGGATAGTGTACCTGGTGGTGGCGTGAGCCAGCCACTATTGAAAGAGGCCGAGGAGCCACGTGCTGAGGATGATTCATCACGAAGGGCAACAGGAACATTTAAGAAACTCCCCTCTCTGGGGGATTTGATTTGCTTGCTCAAGTGCAGTCCCACGTTCTCGCAAGCAGCAGTAGTTTCGTTCTTCAATAGTCTTGTGGACGGTGGCTTGATGGCTGTAGTGCTGTATTATTTAAAGGCACGTTTTCAATTCAACAAGAACCAGTTTGCAGATTTGTTGATGATTACTGGAGTTGGAGCTACTCTTGCACAACTATTTCTCATGCCCATTTTAGTGCCTGTTATAGGAGAGGAGAAGCTGCTCTCCACAGGGCTCTTGATTGGCTGCATAAATGTCTTTGTCTACAGTATAGCATGGTCAGCATGGGTTCCTTATGCTCTAGCAGGTTGCTCTATCTTCACAGTTTTTGTGCGGCCAAGTTTATGCAGCATTGCATCGAAGCAAGTTGGACCTACAGAACAGGGAATGGTTCAAGGATGTCTTTCAGGAATTAGTTCCTTCGCCAACATCATTGCTCCGTTAGTTTTCAGTCCACTAACAGCCTTATTCCTGTCAGAAGATGCACCGTTTTACTATCCTGGCTTCAGTCTAATGTGCCTTGGGCTAGCTATGATGATAGCATTTTTTCAGAGTCTAATGATCCGAGCTGCTCCTCCTATCGCGGGTGGCAAAATTAGCAATAACCGCTGCACGGAAACTTTGGTCTGA 1332 0.4647 MEGLAGLSHLFVTIFLTGFGSVIAIPSITDVTMAALCPGQDQCSLAIYLSGIQQAMAGVGSVVMTPLIGNLSDRYGRKALITLPLTLSVLPYVILAYSRETQFFYAYYVVKTLASMAGEGSFHCLALAYVADKVPDGKRTSAFGILAGVGSASFVGGTLAARFLSTALTFQVAAVSSMIALVYMRIFLKDSVPGGGVSQPLLKEAEEPRAEDDSSRRATGTFKKLPSLGDLICLLKCSPTFSQAAVVSFFNSLVDGGLMAVVLYYLKARFQFNKNQFADLLMITGVGATLAQLFLMPILVPVIGEEKLLSTGLLIGCINVFVYSIAWSAWVPYALAGCSIFTVFVRPSLCSIASKQVGPTEQGMVQGCLSGISSFANIIAPLVFSPLTALFLSEDAPFYYPGFSLMCLGLAMMIAFFQSLMIRAAPPIAGGKISNNRCTETLV* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02510 443 CDD MFS_SLC46_TetA_like 10 421 - -
Lapu7g02510 443 PRINTS Tetracycline resistance protein signature 365 388 IPR001958 GO:0022857
Lapu7g02510 443 PRINTS Tetracycline resistance protein signature 81 105 IPR001958 GO:0022857
Lapu7g02510 443 PRINTS Tetracycline resistance protein signature 50 69 IPR001958 GO:0022857
Lapu7g02510 443 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 7 419 - -
Lapu7g02510 443 Gene3D MFS general substrate transporter like domains 6 417 IPR036259 -
Lapu7g02510 443 Pfam Major Facilitator Superfamily 10 381 IPR011701 GO:0022857|GO:0055085
Lapu7g02510 443 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 427 IPR020846 GO:0022857
Lapu7g02510 443 SUPERFAMILY MFS general substrate transporter 10 417 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02510 Lapu-Chr7 41501411 41507919 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02510 2 442 Organic Solute Cotransporters AT2G16990 45.614 1.25e-125 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02510 - - gmx:100805770 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02510 7 41501411 41507919 Lapu7g02510 7 41501411 41507919 ECH