Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02502 ATGGCGTTTTGGCACCGAATCGGGAAGTCAAAGCTCAGAACCCTCTGCACCCAATTTCAACGATCTTACATTCATCTTCCCCATGCTTCCGCCCCCAAACCCTGGCCTATGGACATTCCACAACAGAATTCCGTGTTTCATGCCAGACCCACAAGCGTTTTCAGTACCGTGAGGTTCTTCGCTGCTCCTGTTCAGTTTCAGGTAAAGCACAATGAGGAGGAGGATCCAAGTGAGCGACGGTTGAATGAGAAAATCAAAGCTCCATATATCAGGCTTGTTGTGGATGATGATCATTCAATAGTACCAACGTTTGAAGCATTGAAACGTGCCAAGGCGCTTAAACTTGATTTAGTTGAGGTTGATAAAAGTGCTAAACCTCCTGTCTGTAAAATTATGGACTTCAACAAGGAAATGTACAAGCGACAAGTATGGGAAAAGGAGCGTGCTAAAAGCAGGGCTGACATGACGCTACGAAAGGATACTAAAGAAGTGCGGTTTTCTGAAAAAACCGAAGCAAAAGACCTGAAAAACAAAGCAGATATGATTAGAAAGTTAATGGAGAAGGGTTATCGAGTGAAGTGCAAGGTATCAGGCAAGGAAAATCAGGACTTGACAGTATTATTTTCTCCTCTCCTTGCTCTGATGGAAGATATATGCGTTGTGGAAAGTGGACCATCAATGGCAAAAAAAGATGCATATATGATAGTCAGACACATTAAGTTTGGGCGCTCGAAGAAGAATGGGAAAAAATTTGAAGCAGCAAATGTTATGACTGAGGATGGTGATATGGAGACGTCAACAGCCAATTCTAGTGATTCTGTTGACTATGAGAGTCGAGCAGAATCTGGATTTGAAACGGAGGAGGACCCGTCTGAAGGAGACAAGTATTCTAAAAGTTCCTGGTCTGCATTTAGCAGCAATATGAACATGACTGCCTCTCCTGATTATGAAACAAATGCTGCAGCACATACAACCTTTCTGTCAAGAAGTGATGATCCTGTATCTCCTCCTGTGTTCGAGAATAGATATAGGAGAACTAATCATCAAGGTCAAAATAACCACCAATCTAATGCCCAAGTGCCTCCTGCTGAGACTGAGAATAGATACAAAAGAGTAGATCCAAGAAACAGATTCCAGCAAACATCAAACACTACAGGTATGAACAACTATCAAGGTCCAGGAACAAGAGATGCATTTAGGTCGCCACCGCCGAATAATAATGTTGATACCAGAACAGAAAATAACAGGCAAGCTTTTACTCCTCCTGGTTCAAGACACTCAATGCCTTCACGTGAGAATATCCACAATCATCCTCCATATGCTTCTAATACTCCTAGACCTGGTTATGGCAATTTTAGTGGTCCAAATGAGGGTATCCCCAAGCATCCTGGTGCTCCCCATACCACAAGACCTTCTAGTTATGGCAGTTTTAGTGCTCCAAATGATGGCATCCCCAAGCATCCCAGTGCTCCCAATACTCCCAAGACTTTCTAG 1494 0.4311 MAFWHRIGKSKLRTLCTQFQRSYIHLPHASAPKPWPMDIPQQNSVFHARPTSVFSTVRFFAAPVQFQVKHNEEEDPSERRLNEKIKAPYIRLVVDDDHSIVPTFEALKRAKALKLDLVEVDKSAKPPVCKIMDFNKEMYKRQVWEKERAKSRADMTLRKDTKEVRFSEKTEAKDLKNKADMIRKLMEKGYRVKCKVSGKENQDLTVLFSPLLALMEDICVVESGPSMAKKDAYMIVRHIKFGRSKKNGKKFEAANVMTEDGDMETSTANSSDSVDYESRAESGFETEEDPSEGDKYSKSSWSAFSSNMNMTASPDYETNAAAHTTFLSRSDDPVSPPVFENRYRRTNHQGQNNHQSNAQVPPAETENRYKRVDPRNRFQQTSNTTGMNNYQGPGTRDAFRSPPPNNNVDTRTENNRQAFTPPGSRHSMPSRENIHNHPPYASNTPRPGYGNFSGPNEGIPKHPGAPHTTRPSSYGSFSAPNDGIPKHPSAPNTPKTF* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02502 497 NCBIfam translation initiation factor IF-3 78 236 IPR001288 GO:0003743|GO:0006413
Lapu7g02502 497 MobiDBLite consensus disorder prediction 258 299 - -
Lapu7g02502 497 MobiDBLite consensus disorder prediction 346 497 - -
Lapu7g02502 497 Pfam Translation initiation factor IF-3, N-terminal domain 81 147 IPR019814 GO:0003743|GO:0006413
Lapu7g02502 497 Gene3D - 73 148 IPR036787 GO:0003743|GO:0006413
Lapu7g02502 497 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 80 149 IPR036787 GO:0003743|GO:0006413
Lapu7g02502 497 Gene3D - 157 246 IPR036788 GO:0006413
Lapu7g02502 497 MobiDBLite consensus disorder prediction 376 429 - -
Lapu7g02502 497 MobiDBLite consensus disorder prediction 278 295 - -
Lapu7g02502 497 FunFam Translation initiation factor 3 (IF-3) family protein 157 246 - -
Lapu7g02502 497 PANTHER TRANSLATION INITIATION FACTOR IF-3 6 273 IPR001288 GO:0003743|GO:0006413
Lapu7g02502 497 MobiDBLite consensus disorder prediction 436 450 - -
Lapu7g02502 497 MobiDBLite consensus disorder prediction 346 363 - -
Lapu7g02502 497 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 160 240 IPR036788 GO:0006413
Lapu7g02502 497 MobiDBLite consensus disorder prediction 260 277 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02502 K02520 - vun:114192546 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02502 7 41400362 41406397 Lapu7g02502 7 41400362 41406397 ECH