Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02498 ATGGGAGTTCAACGGCATGAAGCGCTTGCTGAAGACGAGCCTGCTGAAAATGCTTGTGCTAGTAGTTCTTTGAACCAAGTTGCTCTTCCCAGTGAGTCTGCCAATAGCAATCCATGTGTAAATACTGAAAGTAGTGAAGTCAATGAATCGGGTGACATTTCTTACAAGAAAAGTAATACGTCTCATATCTATAGACAAGACGTTGTGAAAAATAATACTAGTGGTATGATTGGGATTGTGACAGAAGTTGCTGGTGATTCAGATTCAGATTCAGATAGTAGCATCACCGATGATGAGAATGACAGTGAGGATGAGGATGGTGATGGTGAGGAAGGTGATGACAGTAATAATGCAAGCAGGAATTCTGAAAGTAATGTTTCTGCTGGGCATTGTAAAAGCGACGCACTTCTGGCTGACCAGCTGCGTGTACTGTGGATGGACGAATCTGAATCCACTCAAAATTTCAGTGATGTTGAAGTTGTTGATCGTGGATTTTTACATGGTGATTTTGTGGCTGCGGCTTCGGACCCTACTGGGCAAGTGGGTGTGGTTGTTGATGTCAATATATGTGTTGATCTGTTGTCTCATGATGGATCTATAATAAAAGATGTCTCGTCAAAAAACATAAAGCGTATTAGGGATTTCACTGTTGGTGATTATGTGGTGCATGGGCCCTGGCTGGGCAGGATCGATGATGTTTTGGATAATGTAACTGTCTTATTTGATGATGGTTCTGTTTGTAAAGTCTCAAAAGCCGATCCATTGAATCTTAAACCAATTTCTAAGAATATTCTTGAAGATGGGCATTTTCCCTATTACCCTGGGCAACGGGTAAGGGCTAGCTCCTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTGGCTTGTGGAAAGCTAATAGGTTAGAAGGTACGGTAACTAAAGTTACAGTTGGATCGGTGTTTGTTTATTGGATAGCATCTGCAGGTTATGGGCCTTATTCTTCTACTGCCCCAGCTGAGGAGCAGAGTCCAAAAAACTTAAAATTGTTGTCTTGTTTTGCTCATGCAAATTGGCAATTGGGTGATTGGTGTCTATTACCCTCATCAGTGCTGTCATCCTCAGCTTCTATGGACAAAGGCATATCAAAATTGGAACTTAACGATTCTGCTAACAATGAATTAGATTCTAATCAGACAGGAAGTGGGTGTGATTCCGAAGAAGCTACTGTAGAGGAAACAAATGGGAATAAGGATACTATGGACCTTGATCCAGCTGATACTTTGGAAGGGAATGACGGACATGAGAAAAGTAATTCTTCACGTGATTCTAGCTCATGCTGCAGTTCTATCTCCGTATCAAAGGAACCTGTCCATGAAGCTTGGCCTCTTCACCGCAAAAAAATTAGGAAAGTTGTCATCAGGAAAGAAAAAAGGGCCCGAAAGAAAGAGGAAAGTTTTGAGAAAGCTCTTTTAATTGCCAACACGAGAACAAAAGTTGATGTTGCCTGGCAGGATGGAACCATAGGGCATGAACTGAATTCTACAAGTTTGATTCCTGTAGATAATCCTGGTGACCATGAATTCGTTTCAGAACAATATGTGGTTGAGAAGACCTCCGATGATGGTGAGGATATTTCTGAAGCTAGGCGAGTTGGGGTTGTGAGAAGTGTTAATGCAAAGGAGCGGACAGCTTGTGTGAGGTGGTTAAAAAAGGTTGCTAGAGCAGAAGATCCTCGAGAGTTTGACAATGAGGAAGTTGTAAGTGTGTATGAGCTAGAGGGCCATCCAGATTATGATTACTGCTATGGGGATGTGGTTGTTCGCCTGACACCTGTGTCTGTACATTTAGAAACTGCTTCTGTTGGAGAGTCCACTGAGAAATCAGAGCAGAAAACTGAAGAGTGTGGAATTAAAAAGGAAGCGAAAGGCCAAACTGATGCTAATAGAGTAGAAAATGCATCTAGTGATACTTCTGTGCAATTTTCTGATCTCTCTTGGGTTGGAAATATAACTGGCCTTAAGAATGGTGATATTGAAGTTACTTGGGCTGATGGGATGGTGTCAACGGTTGGGCCCCAAGCAATCTATGTGGTTGGTCGAGACGATGACGATGAATCAATTGCTGCTGGGAGTGAAATAAGTGATGCTGCAAGCTGGGAAACTGTTAATGATGATGAAATGGATGTCCTCGAGGATTCCAGAGAGGATATTGAGAGGGAAAATTCGAGCAGTGTTACTTCTGATGTGGAAGAAAGTGGAGAGAATGATTTTGGTAGGGCTGCTGCACTTTCTGTTCCCCTAGCAGCATTTCGGTTTGTCACTAGACTTGCCACTGGAATATTCTCAAGGGGTCCAAGGAACTCAGATCCTATTGACGTGCAGATAAAAGCTGGACATGAACATCCATCACCAGTAGTTAATGATGAGTCTAGTTCGCAGAAACGTATTGCCATTGATGGTGATACTTCAGGCAATAAGAATGGAAGATACGAGGAGGTTGTGCCGGAAGCAACTGAAACTCTCGAAGCATGTGAGGCACTCTGTGGCTTAAAAAATGAAGATGCTCTTGCAAGTTGTGATGACAAGAGTTGCAGTTTGAAACATTTTGACATAACTCAAGATCCATCAGACCACTATTTTATTGGTGCAAATGGACAGGGTAACAACCGGAAATGGTTAAAGAAAGTACAACAAGATTGGAACATACTGCAGAATAACCTTCCTGAGGAAATCTATGTACGAGTTTATGAAGATAGAATGGATCTATTGAGAGCAGTTATTGTAGGGCCATATGGAACCCCTTACCAAGATGGACTCTTTTTCTTTGATTTTCACCTACCGCCAGAATACCCTGATGTTCCACCGTCTGCATACTATCACTCTGGTGGTTGGCGAATTAACCCTAATTTGTATGAGGAAGGTAAGGTTTGCCTTAGCCTTCTAAATACATGGACTGGCAGAGGAAATGAAGTATGGGATCCAAAATCCTCTAGCATACTTCAAGTCCTGGTTTCACTGCAAGGTTTAGTACTCAATTCTAAGCCTTACTTCAATGAAGCTGGGTATGATAAGCAGATTGGAACTGCCGAAGGAGAGAAGAATTCATTATCATACAATGAGAATACCTTTTTACTGAACTGCAAGACTATGATGTATCTCATGAGGAAACCCCCCAAGGATTTTGAAGTGCTCGTCAAAGAACATTTTAGGAGACGGGGCCATAACATTCTTAAGGCTTGTGATGCATATATGAAAGGTTGCTTGATTGGCTCGTTGACTAAAGATGCCTCCGTTAGTGAAAAAAGCGGTCAGAATTCAACCTCTGTGGGTTTCAAGTTGATGTTAGCCAAGATAGTGCCAAAGCTTTTCTTGTCACTAAGTGAGGTTGGAGCTGATTGCGAGGAATTTAGGCATCTGAAAGATTTGTAG 3408 0.4202 MGVQRHEALAEDEPAENACASSSLNQVALPSESANSNPCVNTESSEVNESGDISYKKSNTSHIYRQDVVKNNTSGMIGIVTEVAGDSDSDSDSSITDDENDSEDEDGDGEEGDDSNNASRNSESNVSAGHCKSDALLADQLRVLWMDESESTQNFSDVEVVDRGFLHGDFVAAASDPTGQVGVVVDVNICVDLLSHDGSIIKDVSSKNIKRIRDFTVGDYVVHGPWLGRIDDVLDNVTVLFDDGSVCKVSKADPLNLKPISKNILEDGHFPYYPGQRVRASSSSVFKNSRWLSGLWKANRLEGTVTKVTVGSVFVYWIASAGYGPYSSTAPAEEQSPKNLKLLSCFAHANWQLGDWCLLPSSVLSSSASMDKGISKLELNDSANNELDSNQTGSGCDSEEATVEETNGNKDTMDLDPADTLEGNDGHEKSNSSRDSSSCCSSISVSKEPVHEAWPLHRKKIRKVVIRKEKRARKKEESFEKALLIANTRTKVDVAWQDGTIGHELNSTSLIPVDNPGDHEFVSEQYVVEKTSDDGEDISEARRVGVVRSVNAKERTACVRWLKKVARAEDPREFDNEEVVSVYELEGHPDYDYCYGDVVVRLTPVSVHLETASVGESTEKSEQKTEECGIKKEAKGQTDANRVENASSDTSVQFSDLSWVGNITGLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESIAAGSEISDAASWETVNDDEMDVLEDSREDIERENSSSVTSDVEESGENDFGRAAALSVPLAAFRFVTRLATGIFSRGPRNSDPIDVQIKAGHEHPSPVVNDESSSQKRIAIDGDTSGNKNGRYEEVVPEATETLEACEALCGLKNEDALASCDDKSCSLKHFDITQDPSDHYFIGANGQGNNRKWLKKVQQDWNILQNNLPEEIYVRVYEDRMDLLRAVIVGPYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQIGTAEGEKNSLSYNENTFLLNCKTMMYLMRKPPKDFEVLVKEHFRRRGHNILKACDAYMKGCLIGSLTKDASVSEKSGQNSTSVGFKLMLAKIVPKLFLSLSEVGADCEEFRHLKDL* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02498 1135 SMART ubc_7 887 1044 - -
Lapu7g02498 1135 CDD UBCc 887 1037 IPR000608 -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 725 746 - -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 1 59 - -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 18 59 - -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 381 442 - -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 613 648 - -
Lapu7g02498 1135 FunFam Probable ubiquitin-conjugating enzyme E2 23 850 1123 - -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 82 128 - -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 91 112 - -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 615 639 - -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 381 402 - -
Lapu7g02498 1135 Pfam Ubiquitin-conjugating enzyme 889 1033 IPR000608 -
Lapu7g02498 1135 SUPERFAMILY UBC-like 865 1051 IPR016135 -
Lapu7g02498 1135 Gene3D Ubiquitin Conjugating Enzyme 851 1116 IPR016135 -
Lapu7g02498 1135 MobiDBLite consensus disorder prediction 403 432 - -
Lapu7g02498 1135 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 82 1126 - -
Lapu7g02498 1135 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 884 1044 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02498 Lapu-Chr7 41367214 41376064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02498 162 362 Miscellaneous Gene Families AT2G33770 42.079 3.25e-50 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02498 K10581 - gmx:100809513 1917.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02498 7 41367214 41376064 Lapu7g02498 7 41367214 41376064 ECH