Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02326 ATGCAAAACCCCAGTTTCCTCAGCCTCATCGTCGTTTCCCTCTCTCTCATCCTATTCCACACCACAAACAACATCATCCCAGTCCAAGCCCTCACCTCACCCTATGACATTGCAGCCCTCAAAGCCTTCAAGGCCTCAATCAAACCCTCCTCCATCCCACCCTCGTCTTGCCTCGCCTCATGGAACTTCATCAGCGACCCCTGCTCACTCCCTCGCCGCACCAACTTCATCTGCGGCCTCACCTGCACCCCTGACTCCAAAAGAATCAGCCAAATCACTCTCGACCCTGCAGGGTACTCAGGCACACTCACCCCACTAATCTCTCAACTCACACAACTCATCACACTTGACCTCTCCGATAACAACTTCTTCGGCTCAATCCCCTCTTCAATCTCCTCCCTCTCCAACCTCCAAACCTTAACCCTCCAATCCAATTCCTTCTCAGGCCCAATCCCTCCCTCCATAACCAACCTCAAATCACTCCAATCTCTTGACTTATCACACAATTATCTTTCTGGGTATCTCCTAAACTCCATGAACTCCCTCACCAAACTCAGCAGACTCGATCTCAGCTTCAACAAACTAACCGGTGCAATCCCCAGACTCCCACCCAACTTGCTCGAACTGGCGATCAAGGCCAATTCTCTATCTGGGCCTCTCCAAAAACAGACCTTTGAAGGGATGAACTACTTAGAAGTGGTGGAACTAAGCGATAACAAGCTCGCCGGAACGGTGGAATCGTGGTTCTTCTCTTTACCGTCACTGCAGCAAGTAAACTTGTCCAACAACACCTTAACGGGGGTACAGATCTCGGGACCACGCGCGGCCCCTGGCGGAATCGGAACCAGCAGCAACCTCGTCGCCCTTGACCTTGGGTTTAACAGAATCCGAGACTTGCCCGCGAATCTCGCCTCGTTTCCCGCGCTGTCATCCCTGTCGATTCGCTACAATGCGCTACATGGCGCGATCCCTCTGGAGTACGGCCAGATCAAGTCCATCGGGAGGCTCTTCCTGGACGGAAACTTCCTCATCGGAAAGCCTCCGGCAGGACTTGTCGCGGCCGGCAGGGCGATTTCCGGAAGTCTGGGGGACAATTGTCTGCAGGCGTGTCCAAAGTGGTCGCAGCTGTGCTCGCCCGCACAGAAACCAATCTCAGTTTGCAAGCGAGTCTACAGTGGTAGACCACCAACACCGTAA 1197 0.5363 MQNPSFLSLIVVSLSLILFHTTNNIIPVQALTSPYDIAALKAFKASIKPSSIPPSSCLASWNFISDPCSLPRRTNFICGLTCTPDSKRISQITLDPAGYSGTLTPLISQLTQLITLDLSDNNFFGSIPSSISSLSNLQTLTLQSNSFSGPIPPSITNLKSLQSLDLSHNYLSGYLLNSMNSLTKLSRLDLSFNKLTGAIPRLPPNLLELAIKANSLSGPLQKQTFEGMNYLEVVELSDNKLAGTVESWFFSLPSLQQVNLSNNTLTGVQISGPRAAPGGIGTSSNLVALDLGFNRIRDLPANLASFPALSSLSIRYNALHGAIPLEYGQIKSIGRLFLDGNFLIGKPPAGLVAAGRAISGSLGDNCLQACPKWSQLCSPAQKPISVCKRVYSGRPPTP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02326 398 ProSiteProfiles Leucine-rich repeat profile. 285 307 IPR001611 GO:0005515
Lapu7g02326 398 Gene3D Ribonuclease Inhibitor 203 390 IPR032675 -
Lapu7g02326 398 Gene3D Ribonuclease Inhibitor 35 202 IPR032675 -
Lapu7g02326 398 Pfam Leucine Rich Repeat 113 134 IPR001611 GO:0005515
Lapu7g02326 398 Pfam Leucine Rich Repeat 136 158 IPR001611 GO:0005515
Lapu7g02326 398 Pfam Leucine rich repeat 204 265 IPR001611 GO:0005515
Lapu7g02326 398 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 107 389 - -
Lapu7g02326 398 SMART LRR_typ_2 158 181 IPR003591 -
Lapu7g02326 398 SMART LRR_typ_2 252 275 IPR003591 -
Lapu7g02326 398 SMART LRR_typ_2 110 134 IPR003591 -
Lapu7g02326 398 SMART LRR_typ_2 284 306 IPR003591 -
Lapu7g02326 398 SMART LRR_typ_2 182 209 IPR003591 -
Lapu7g02326 398 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Lapu7g02326 398 PRINTS Leucine-rich repeat signature 161 174 - -
Lapu7g02326 398 PRINTS Leucine-rich repeat signature 182 195 - -
Lapu7g02326 398 Pfam Leucine Rich repeat 283 298 IPR001611 GO:0005515
Lapu7g02326 398 Pfam Leucine Rich repeat 182 197 IPR001611 GO:0005515
Lapu7g02326 398 SUPERFAMILY L domain-like 75 368 - -
Lapu7g02326 398 FunFam Nuclear pore complex protein NUP107 33 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02326 Lapu-Chr7 39484067 39486341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02326 25 372 Receptor kinase-like Gene Family AT3G56370 32.376 8.75e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02326 - - gmx:100801713 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02326 7 39484067 39486341 Lapu7g02326 7 39484067 39486341 ECH