Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02292 ATGACCATCGACATCCAGACCTTGGAAGACAGGTATATTGATTCTTGCAGGAGACACGGTGTTTTGCCTAATTCTTCTATTTTGTCAAGTCTTTTCAAGGCTGAGGTAAAAAAGTCCAACCATGAGCTGTGCAGGCTGAAGATTTTAATTGATGACCTAAAGGATGTTGATATTGCTCCACTTCTTGACTTGTGCATGAACTTTGATGCTTCTGAAATAGAAGCTGTTGATGTACGTAATGAATCATCATGTGTATTAAATGGAGAATATGCATTATCATTCATGCGTGCTGTTAATAAAAAGCTTCGAGTAGTCCATCTACAGGATCTGTCATATGGAAAAGACTTCTTACGGGATATTTCACAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTGCTCACGTTTCCGGAAGCTGAACTTAACGGGGGAGTTCATGCATATGCATACCTTAAATCTTGATTTCAGTTCTTCCCTTACCAGTTTCCAGGAGGATTGTTTTAATTGTATGCCCAATCTAATGCGCCTCTCAATGTGTGATACAAGGATTACAAATCTTTGGACAACTGTTGCAGCTCTCACTAAGCTTCCTTCTTTAATAGAATTAAGATTTCAATATTGGCAGTATTGCAATGATGCTGGGACATCGTTTATATCATGCAATGGGAAGTCTGATGACACTGCTGATTTTAGCCTGCTTGATAGACTTCCTTTTATTGGTGAACCCTTCACTGATACAACTGAACTAACAGATCCCAACTTTAGTGCTGAAGATCCACTAAGAAATTTTTATTCCTTGGATGAAGAAATTATAAATCATGATGTTCAAAGCATGGTCGAGGATTCGTCAGATGATAGTGAAGTTGACTTTACTAGTCATCATCATAGATACTGGTCGTCAGATGTTTTTCCTGGGTGGAGTTCTGAAGTGCCTCTTCTTCATGAGAATGAAGACGAAGAAGATTCATCACAAGGCGCTTTTATAGAGCCTATTGCTGATGTTTCTATGAAGTATATGTCTCGTCATGCATCACCAATATGCTATGAGAAGCATTACAGAGAGTTCATGATTGCTTCATTGCCAAATCTGAAAAACTTAGATAATATGCCTATCAGAAAGATTGACAAGGAAAGGGCTACTGGAATATTTTCTCAATACTTTGAATATCTTCCGTACAAACGGAAACACAAAGAGAGTGTTGTAAGTATCTTACAGAAGAGAGAAATAAAATCAGGCCACAATAAGGTGCAATCTTCCAAGCGTAGGCCATCATATCCTTCTGGACAGTCCCAACATTTTTATACCAGGTCTCTTTCTGCTGCTAAATTGGGGTGCTCAACTTGGCCTTTCTTGCAACCCCTTTCTCTATTAGGATGTGAATTGGACAAGGGCTTTCATCCAAGGCAATTTGAGTACCATCCATCTGACTCCAGTTTGATGGTCTTTGGAACTTTAGATGGTGAAGTTGTTGTCATCAACCATGAGAATGAACGTATTGTGAGTTATATTCCATCACTTGGAGCAATGAATAGTGTTTTGGGTCTCTGTTGGCTCAAAAAATATCCCTCTAAGCTTATAGCAGGATCAGACAATGGTTCCTTGAAATTGTATGACATCCACCATATACCAAGAAAAGTTACTGGCATACATGGGAATTTTGGTTGTGTTACCTTTGATGAATTTGATCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTACTCAAGAAATGTTGCTTTATATGACATCAACAGTGGAAAACGCTTACAAGTGTTCACAGATATGCATCGTGGGCATATTAATGTAGTCAAATTTGCTAATCATTCCCCGTCAATTTTTGCCACTTCATCATTTGATCACGATGTAAAGATGTGGGACTTGAGACAAAAACCAATACACCCCTGCTTTACAGTTTCAAGCTCCAGAGGAAATGTGATGGTTTGCTTTTCTCCGGATGATCAATATATTCTTGCTTCAGCAGTTGATAATGAGGTTAGACAATATCTGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCCACCGAAAGTTCTCAAAATTACACCCGTTCTTATTACATGAATGGGAGGGACTACATCATAAGTGGGAGTTGTGATGAGCACGTCCGAATTTGCTGTGCTCAAACAGGGAGGCGCCTGAGAGATATATCCCTTGAGGGAAGAAACTTAGGAAGTTCCGTGTTTGTTCAGTCTTTGAGGGGTGATCCTTTCCGGGATTTCAATATGAGCGTGTTAGCAGCTTACATGCGGCCAGGCTCCAAGTCAAAAATTGTGAAGATCAACTTACTAGCATCTAGTGGCCATGCCAACAAAGATGATCCTGATGATTTGCACCCTTGCCTGTTTCACAGTATGGGAGCTTGA 2415 0.3971 MTIDIQTLEDRYIDSCRRHGVLPNSSILSSLFKAEVKKSNHELCRLKILIDDLKDVDIAPLLDLCMNFDASEIEAVDVRNESSCVLNGEYALSFMRAVNKKLRVVHLQDLSYGKDFLRDISQRGLACQVLTLRCSRFRKLNLTGEFMHMHTLNLDFSSSLTSFQEDCFNCMPNLMRLSMCDTRITNLWTTVAALTKLPSLIELRFQYWQYCNDAGTSFISCNGKSDDTADFSLLDRLPFIGEPFTDTTELTDPNFSAEDPLRNFYSLDEEIINHDVQSMVEDSSDDSEVDFTSHHHRYWSSDVFPGWSSEVPLLHENEDEEDSSQGAFIEPIADVSMKYMSRHASPICYEKHYREFMIASLPNLKNLDNMPIRKIDKERATGIFSQYFEYLPYKRKHKESVVSILQKREIKSGHNKVQSSKRRPSYPSGQSQHFYTRSLSAAKLGCSTWPFLQPLSLLGCELDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHENERIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHHIPRKVTGIHGNFGCVTFDEFDQLTSVHVNSTDELFLASGYSRNVALYDINSGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDHDVKMWDLRQKPIHPCFTVSSSRGNVMVCFSPDDQYILASAVDNEVRQYLAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHVRICCAQTGRRLRDISLEGRNLGSSVFVQSLRGDPFRDFNMSVLAAYMRPGSKSKIVKINLLASSGHANKDDPDDLHPCLFHSMGA* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02292 804 PANTHER BNAC09G30780D PROTEIN 2 801 IPR046377 GO:0071493|GO:0080008
Lapu7g02292 804 SUPERFAMILY WD40 repeat-like 467 733 IPR036322 GO:0005515
Lapu7g02292 804 Pfam WD domain, G-beta repeat 605 634 IPR001680 GO:0005515
Lapu7g02292 804 SMART LRRcap_2 350 368 IPR003603 -
Lapu7g02292 804 SMART WD40_4 497 539 IPR001680 GO:0005515
Lapu7g02292 804 SMART WD40_4 555 590 IPR001680 GO:0005515
Lapu7g02292 804 SMART WD40_4 593 634 IPR001680 GO:0005515
Lapu7g02292 804 SMART WD40_4 639 677 IPR001680 GO:0005515
Lapu7g02292 804 Gene3D Ribonuclease Inhibitor 98 383 IPR032675 -
Lapu7g02292 804 MobiDBLite consensus disorder prediction 412 432 - -
Lapu7g02292 804 SUPERFAMILY RNI-like 91 222 - -
Lapu7g02292 804 Gene3D - 467 752 IPR015943 GO:0005515
Lapu7g02292 804 ProSiteProfiles Trp-Asp (WD) repeats profile. 601 636 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02292 520 720 Miscellaneous Gene Families AT5G08390 23.267 3.27e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02292 - - gmx:100806443 1482.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02292 7 39214094 39222235 Lapu7g02292 7 39214094 39222235 ECH