Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02263 ATGCTATACACCTTTTCTGCTTGGTTTCAGGTCAGTGAAGGAAGTGACACAGTGTCTGTCATGTTCAAAACAAAAGGAAGTGAAGTGGTACGAGGTGGCCAAGTGACAGCAAAGCATGGATGCTGGACGATTCTAAAAGGCGGCATAACTGCAAATTTTTCAAGCCCTGTTGAAATTTTTTTTGAGAGCAAGAATTCAACTGTGGAAATATGGGCTGACAGTGTCGCGTTACAACCATTCACTAAAAAGCAGTGGAGATCACTACAAGACGCCAGCATCGAGAGGGTACGTAAGAGGAGGGTGAGATTCCAGATAACTCGTGTAAATGAAACAGCATTGAAAGGAGCCACAGTCATCGCTAAACCAGTGAAGTTGGACTTCCCATTTGGATGTGGAATGAACCATTATATCCTCACAAGCAAAGACTACCAGAATTGGTTTGTGTCAAGGTTCAAATTCGCAACCTTCACCAACGAGATGAAGTGGTATAGCACAGAGAAACAGCAAGGCGTGGAAAACTACACTGTCTCAGATGCCATGCTGAAATTTACCAAAGAGAATGGCATTTCTGTGAGAGGCCATAACATTTTCTGGGACGATCCAAAATATCAGCCTGAATGGGTCAAGACCCTATCACCTGCGGATTTAACGAAAGCAGCCGCAAGAAGAATGGAATCTGTGGTTTCAAGATACAAAGGACAACTGATTGCATGGGATGTGATGAATGAGAATCTCCACTTCCACTTCTATGAGGACAAATTCGGTGAAAATGCCTCTGCAGAAGCATACGCAACAGCTTACGAGCTTGATCCAAAGCCAAAGATGTTCCTGAACGAGTATAACACCATTGAATATAGTGGGGATGAGGCTTCCAGCCCTGTCAACTATTTGAAGAAAATTAAGGAGATTCTGTCATTTCCAAGAGTTACTGGAATGTCAGCAGCAATAGGCTTGCAAGGCCATTTTGCTACTGGCCAGCCCAACCTTGCTTACATGAGGTCAGCTCTTGATCTGCTTGCTACAACTGGACTTCCAATATGGCTCACAGAAGTGAGTATGGATCCACAACCAAGTCAGGCAGAGTATTTGGAAGAGGTTCTAAGAGAGGCGTACTCTCATCCTGCTGTAGAAGGGATTATAATGTTTTCTGGTCCAGCACAAGCTGGTTTCAATGCCACCACTCTGGCGGATGAGAATTTCAAAAATACTCCTGCTGGAGATGTTGTGGACAAGCTCATTGAGGAGTGGGGAACTGGGCCTAATATTGCCTCTGCAGATGGCACAGGAATGGTAGATATTTCACTGCACCATGGAGATTATGATGTAACTGTTACACATCCTCTAATTCACTCCCCTATGACAATGAATCTAAGTGTAAAGAAAGATCTTTCACTTGACCCCATTCATGTGAAAATGCGTACATAA 1425 0.4379 MLYTFSAWFQVSEGSDTVSVMFKTKGSEVVRGGQVTAKHGCWTILKGGITANFSSPVEIFFESKNSTVEIWADSVALQPFTKKQWRSLQDASIERVRKRRVRFQITRVNETALKGATVIAKPVKLDFPFGCGMNHYILTSKDYQNWFVSRFKFATFTNEMKWYSTEKQQGVENYTVSDAMLKFTKENGISVRGHNIFWDDPKYQPEWVKTLSPADLTKAAARRMESVVSRYKGQLIAWDVMNENLHFHFYEDKFGENASAEAYATAYELDPKPKMFLNEYNTIEYSGDEASSPVNYLKKIKEILSFPRVTGMSAAIGLQGHFATGQPNLAYMRSALDLLATTGLPIWLTEVSMDPQPSQAEYLEEVLREAYSHPAVEGIIMFSGPAQAGFNATTLADENFKNTPAGDVVDKLIEEWGTGPNIASADGTGMVDISLHHGDYDVTVTHPLIHSPMTMNLSVKKDLSLDPIHVKMRT* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02263 474 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 113 412 IPR001000 GO:0004553|GO:0005975
Lapu7g02263 474 SUPERFAMILY (Trans)glycosidases 114 419 IPR017853 -
Lapu7g02263 474 Gene3D Glycosidases 117 419 - -
Lapu7g02263 474 Gene3D - 2 80 - -
Lapu7g02263 474 Pfam Glycosyl hydrolase family 10 123 372 IPR001000 GO:0004553|GO:0005975
Lapu7g02263 474 PANTHER GLYCOSYL HYDROLASE 1 461 IPR044846 GO:0004553|GO:0005975
Lapu7g02263 474 SMART glyco_10 160 412 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02263 Lapu-Chr7 39014417 39017588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02263 2 468 Glycoside Hydrolase AT4G33820 50.316 4.95e-176 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02263 - - gmx:100777980 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02263 7 39014417 39017588 Lapu7g02263 7 39014417 39017588 ECH