Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02262 ATGAAGGTTTCTGCAGAAGGCTTGTTCATCACCATTTGCCTTTTACTGATCTCAGGCTATGGCGTCCATTCTTTGTCTTATGATTATTCTGCTACTACACATTGCTTAACAGAACCTGAGAGAGCAGAGTATGGAGGAGGCATTATAGTAAATCCAGGGTTTGATCTGAACATAGATAGTTGGACAGTGTTTGGAAAAGGATCAATCAAGGAACGAATATCGAAGGAAGGCAATAGATTCATTGTTGCTCACAACAGAGAACAACCATTGGATAGTTTCTCTCAGAAGGTCCACCTTAAGAAAGGAATGCTATACACCTTTTCTGCTTGGTTTCAGGTCAGTGAAGGAAGTGACACAGTGTCAGTGATGTTCAAAACAGAAGGAGGTGAAGTGGTACGAGGTGGCCAAGTGGTCGCAAAGCATGGATGCTGGACCCTTCTAAAAGGCGGCATAACTGCCAACTTTTCGAGCACTGTTGAGATTCTTTTTGAGAGCAAGAATTCAACCGTGGAAATATGGGCTGACAATGTTTCTTTGCAACCATTCACTAAAGAGCAGTGGAGATCGCTACAAGATGCCAGCATTGAGAAGGTACGAATGAGGAAAGTAAGATTCCAGATAACCAATGAAAATGGAACAGCACTGAATGGAGCTACAGTCGTCACAAAAGCAGCGAAGTTGAACTTCCCATTTGGATGTGGAATGAACCATTTTATCCTCACAAGCAAAGATTACCAGAACTGGTTTTCTTCAAGGTTCAAATTCACAACTTTCACCAATGAGATGAAGTGGTATAGTACGGAGAGAATCCAAGGGCAGGAAGACTACACTGTCGCAGATGCCATGCTGAAATTTGCCAAAGATAATGGCATTTCTGTGAGAGGCCATAACATTTTGTGGGACGATCCAAAACATCAGCCTGAATGGGTGAAGACTCTATCACCAGTGGATTTAAAGAAAGCAGCAGAAAAAAGAATGATGTCTGTGGTTTCGAGATACAAAGGACAACTGATTGCATGGGATGTGATGAATGAGAATCTCCACTTCCACTTCTTTGAGGACAAACTCGGCCAAAATGCCTCTGCAGAAGCATATGCAACAGCTTACTCGCTTGATTCAGGGACGCAGATGTTCCTGAATGAGTTTAACACCATTGAATATAGTGGGGATCAGGCAGGCAGCCCTGTCAAATATGTACAGAAAATTAAGGATATTTTGGAATTTCCAGGAGTTGCTGGAATGTCAGCAGCAATAGGGTTGCAAGGTCATTTTGCTAGTGGCCAGCCAAATCTTGCTTACATGAGGTCAGCTCTTGATCTGCTTGCTACAACTGGACTTCCAATATGGCTCACAGAAGTGTGTGTGGATCCACAACCAAGTCAGGCAGAGTACTTGGAACAGGTATTAAGAGAGGGGTACTCTCATCCTGCTGTTGCAGGGATTATTATGTTTGCTGGTCCAGCACAAGCTGGTTTCATACATACTCTGGCAGATGAGAATTTCACAAATACTCCAGCTGGGGATGTTGTGGACAAGCTCATTAAGGAGTGGGGAACTGGGCCTAATATTGCCACAGCAGATGGCAGAGGAATAGTAGATATTTCACTGCACCATGGAGATTATGATGTAACTGTTACACATCCTCTAATCCACTCCCCTATAACAATGAATCTAAGTGTAAAAAAAGATTTTTCACTTGAAACCATTGATGTGAAATTGCATTAA 1725 0.4267 MKVSAEGLFITICLLLISGYGVHSLSYDYSATTHCLTEPERAEYGGGIIVNPGFDLNIDSWTVFGKGSIKERISKEGNRFIVAHNREQPLDSFSQKVHLKKGMLYTFSAWFQVSEGSDTVSVMFKTEGGEVVRGGQVVAKHGCWTLLKGGITANFSSTVEILFESKNSTVEIWADNVSLQPFTKEQWRSLQDASIEKVRMRKVRFQITNENGTALNGATVVTKAAKLNFPFGCGMNHFILTSKDYQNWFSSRFKFTTFTNEMKWYSTERIQGQEDYTVADAMLKFAKDNGISVRGHNILWDDPKHQPEWVKTLSPVDLKKAAEKRMMSVVSRYKGQLIAWDVMNENLHFHFFEDKLGQNASAEAYATAYSLDSGTQMFLNEFNTIEYSGDQAGSPVKYVQKIKDILEFPGVAGMSAAIGLQGHFASGQPNLAYMRSALDLLATTGLPIWLTEVCVDPQPSQAEYLEQVLREGYSHPAVAGIIMFAGPAQAGFIHTLADENFTNTPAGDVVDKLIKEWGTGPNIATADGRGIVDISLHHGDYDVTVTHPLIHSPITMNLSVKKDFSLETIDVKLH* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02262 574 PANTHER GLYCOSYL HYDROLASE 25 562 IPR044846 GO:0004553|GO:0005975
Lapu7g02262 574 Pfam Glycosyl hydrolase family 10 223 464 IPR001000 GO:0004553|GO:0005975
Lapu7g02262 574 Gene3D Glycosidases 217 520 - -
Lapu7g02262 574 Gene3D - 36 182 - -
Lapu7g02262 574 SUPERFAMILY Galactose-binding domain-like 45 181 IPR008979 -
Lapu7g02262 574 Pfam Carbohydrate binding domain 47 168 IPR003305 GO:0016798
Lapu7g02262 574 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 221 513 IPR001000 GO:0004553|GO:0005975
Lapu7g02262 574 SMART glyco_10 262 513 IPR001000 GO:0004553|GO:0005975
Lapu7g02262 574 SUPERFAMILY (Trans)glycosidases 216 520 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02262 Lapu-Chr7 39006166 39011839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02262 23 563 Glycoside Hydrolase AT4G33840 50.826 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02262 - - gmx:100777980 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02262 7 39006166 39011839 Lapu7g02262 7 39006166 39011839 ECH